Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02566 ATGAAGAAGGTGGAGAAGATTCGTCAAATCGTGCATCTGAAGCAGCTGATGGCGCGGTGGAAGCACATGAGCCTCCGGCAGACGGAGAGGCCACCGGCGGGGTCGATCTTCGTGTACGTGGGCCCGGAGCGCACCCGGTTCGCCATCCCGGCCCGCTTCCTGAACCTGCCGGTGTTCGAGGCCCTCCTCCAGCAGAGCGAAGAGGAGTTCGGGCTCCGCGGGCAGGGCGACCACGGCGGGCTCCTCCTGCCCTGCCAAGTCCCCCTCTTCTCCCTCCTCCTCAAACACCTCCACAAAGACCACCACAAATACGGCAACTTCCCCCTCCAGGCCTTCGTCAACATGCTCTCCGACTCCGACCCCTGCAAGGACCACCTCACCCTTTTCACCCCCCTGCTTCACAAAGCCCAAGTCTAA 417 0.6283 MKKVEKIRQIVHLKQLMARWKHMSLRQTERPPAGSIFVYVGPERTRFAIPARFLNLPVFEALLQQSEEEFGLRGQGDHGGLLLPCQVPLFSLLLKHLHKDHHKYGNFPLQAFVNMLSDSDPCKDHLTLFTPLLHKAQV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02566 138 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 119 IPR003676 GO:0009733
Cca09g02566 138 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR71-LIKE 7 119 - -
Cca09g02566 138 Pfam Auxin responsive protein 20 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02566 Cca-Chr9 51239174 51239937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02566 2 111 Calmodulin-binding Proteins AT2G24400 29.078 2.74e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02566 K14488 - gmx:100797463 183.341