Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02558 ATGTCAAGGTTGATTCAAGAGAAGAAGCTAGGAAGTGGACGTATTGTGGCAGTGGCAATTGAAAACAACAAAACAAGCCAATATGCAGCCAAATGGGCAGTGGATAATCTTCTTCCCAAAGACCAAAGTCTCTTATTGCTCCATGTTAGACAAAAAGCAGCTTCCATTCCTACGCCAACTGGAAACTATATATCTCTTGATGGAAACGATGATGTGGCTAGAGCATACATGCAACAAATGGACAATGAATCTAAGGAGCTTTTCGCTTCATTTCGTCTCTTCTGCAATAGAAAGAGTATACAATGCAAAGAAATCTTATTGGAGGACGCGGATATAACTAAGGGATTAATAGAAGGAATTTCCATGTATTCCATTGAGCTTCTGGTTCTCGGGGCACCTTCAAGGAGCGGTCTTGTCAGGAGATTTAGGACATCTGATATTCCAAGTGCCGTGTCCAAAGGGGCGCCACCATTCTGCACTGTGTACATTATTTCCAAAGGAAAAATCTCATCAGTGAAAACTGCTAGTGCTCCACTAGCTGCTAAACCTACAACCCGTTACAATCCATTGCAGCCACAGCAGACTCTCCAAAATCCTGAGAAAATGGATACACAAGTAATACGCAACCCCGTCCCACCACGATCATCAAATGAGAAGCCATCATACATTGCTCCCCAGACACCGGATGAAATGGAAATCATATCACCATTCACAAGACCTAATAGAGGAAATTACAGATCATACGAGTCCTCAGTCACCGACTCTGATATTTCATTCGTGAGCAGTGGAAGGCCAAGTATTGATAGAATATTCCCTTCAATGTATGATGACCTTGACTCTGGAATCAAACCTCGGCTTTCAGCAGGCTCAGAGTTTGATGTCAGAAGCTTTGGCTCTTCATTCTCAGGAGCCAAGTCAATTGATCAGGGTGACTACTCATTCAGTTCACAAGACAGTGGGTCATCGATGTCATCGTccatgctttcagtttcgGATGAAGTGGAAGTTGAAATGAGGAGACTGAAGCTAGAACTGAAGCATACAATGGAAATGTACAGTACAGCATGCAAGGAAGTTATGACAGCAAGGCAAATGACACTAGAACTTCAGCGTTGGAAAGTGGAAGAACAAAGGAAATTGGAAGAGGCACGATTTGCTGAAGAAACAGCATTGGCATTAGCTGAGAAGGAGAAAGCAAAATGTATAGCGTCCATGGAGGCAGCAGAAACATCTCAAAAAATTGCAGAGTTGGAAGCACAAAAGAGAATGAATGCAGAATCTGAGCAGAAGAGGAAGACTGTGGATATCCTTTCACATAGTCCTGCCAGGTACAGAAAATACACTATAGAGGAGATAGAAGAAGCAACAAAATTCTTTTCCAACTCTCTCAAGATCGGTGAAGGTGGTTATGGACCAGTCTACAGGTCTGAACTAGATCACACGCCAGTTGCAATAAAAGTGTTAAAACCAGATGCAGCTCAGGGACGGTCACAGTTTCATCAAGAGGTTGAAGTGCTAAGTTGCATAAGGCATCCAAACATGGTTCTCCTCCTTGGAGCGTGCCCAGAGTTTGGCTGCTTAGTGTATGAGTACATGGCTAATGGAAGTTTGGATGATTGCCTCTTCCGGAGAGGCAACAAAGGAGCTCTTCCCTGGCAGCTAAGATTCCGAATTGCTGCAGAGATTGCCACTGGGCTACTTTTCCTGCACCAGACGAAGCCAGAACCACTGGTGCACCGTGACTTGAAACCTGGAAACATTTTGCTTGACCGTAACTTTGTGAGCAAGATCAGTGATGTGGGATTGGCCAGGCTTGTCCCTCCTTCAGTTGCAGATACTGTGACACAGTATCGCATGACATCAACTGCTGGAACTTTCTGTTACATTGACCCTGAGTACCAGCAAACGGGTATGCTGGGAATCAAATCTGATATTTACTCACTGGGGATCATGCTTCTACAGATTATAACAGCGAAGCCGCCAATGGGTTTGACTCACCATGTTGGAAGATCTATTGAGAAAGGGACTTTCGCCGAGATGCTCGACCCAGCCGTTGTGGATTGGCCGGTTGAACATGCCTTGCATTTTGCTAGGCTTGCATTGGGGTGTGCAGAAATGAGAAGAAAAGATAGACCTGATCTTGGAAAAGTTGTATTACCTGAGCTCAATAAACTCAGAGATTTTGctgaagacaacatgcccatgatgatgatgttcggTGTCCCCACAGGATTCACTCCCAGAAGCAACTACAATTACTCACACTCTTCCATTTCCTCGGCTCAAGATTCCATGAGTGATTTCCAATCGCTGTCAGGAATATCCAGCCGCTCAAGCTCAAGCTCATCGTGTGCATAA 2358 0.4347 MSRLIQEKKLGSGRIVAVAIENNKTSQYAAKWAVDNLLPKDQSLLLLHVRQKAASIPTPTGNYISLDGNDDVARAYMQQMDNESKELFASFRLFCNRKSIQCKEILLEDADITKGLIEGISMYSIELLVLGAPSRSGLVRRFRTSDIPSAVSKGAPPFCTVYIISKGKISSVKTASAPLAAKPTTRYNPLQPQQTLQNPEKMDTQVIRNPVPPRSSNEKPSYIAPQTPDEMEIISPFTRPNRGNYRSYESSVTDSDISFVSSGRPSIDRIFPSMYDDLDSGIKPRLSAGSEFDVRSFGSSFSGAKSIDQGDYSFSSQDSGSSMSSSMLSVSDEVEVEMRRLKLELKHTMEMYSTACKEVMTARQMTLELQRWKVEEQRKLEEARFAEETALALAEKEKAKCIASMEAAETSQKIAELEAQKRMNAESEQKRKTVDILSHSPARYRKYTIEEIEEATKFFSNSLKIGEGGYGPVYRSELDHTPVAIKVLKPDAAQGRSQFHQEVEVLSCIRHPNMVLLLGACPEFGCLVYEYMANGSLDDCLFRRGNKGALPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIITAKPPMGLTHHVGRSIEKGTFAEMLDPAVVDWPVEHALHFARLALGCAEMRRKDRPDLGKVVLPELNKLRDFAEDNMPMMMMFGVPTGFTPRSNYNYSHSSISSAQDSMSDFQSLSGISSRSSSSSSCA 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02558 785 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 783 - -
Cca09g02558 785 SUPERFAMILY Protein kinase-like (PK-like) 437 718 IPR011009 -
Cca09g02558 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Cca09g02558 785 ProSiteProfiles Protein kinase domain profile. 459 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02558 785 MobiDBLite consensus disorder prediction 308 328 - -
Cca09g02558 785 CDD STK_N 15 167 - -
Cca09g02558 785 Gene3D Phosphorylase Kinase; domain 1 436 531 - -
Cca09g02558 785 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 145 - -
Cca09g02558 785 PANTHER OS02G0152300 PROTEIN 1 783 - -
Cca09g02558 785 Pfam Protein kinase domain 462 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02558 785 Gene3D Transferase(Phosphotransferase) domain 1 532 737 - -
Cca09g02558 785 Pfam Universal stress protein family 14 145 IPR006016 -
Cca09g02558 785 SMART serkin_6 459 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02558 785 Gene3D HUPs 14 164 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02558 Cca-Chr9 51142185 51147061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02558 16 769 Receptor kinase-like Gene Family AT5G35380 56.899 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Cca09g02558 Pkinase 6.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02558 - - gmx:100803837 1272.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02558 09 51142185 51147061 Cca09g02558 09 51142185 51147061 ECH
Cca09g02558 09 51142185 51147061 Cca08g00014 08 418618 422270 PCT