Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca09g02554 | ATGGGGATGTGCTTCAGCATTGAAGATGAAAAGCGCCTTTCCGTCTCCGATACGAGCGCCAAGCCTAAACCTGCTGGATCTGCAGATCGTGAATCTGGCGCTCCATTGGTGTCGAGTTCGATGAACATCAAAGATCTCCGCAAAAGCGCTGGACACTGCAATGTGGATATTTTCACGTACGAGGAGCTGAGGCTCGCGACGAAGCACTTTCGTCCCGATTTCATTTTAGGAGAGGGAGGATTTGGAGTTGTATATAAAGGAGTCATAGACGATAGCGTAAGGTCAGGTTACAAGACCATCGAGGTCGCCATTAAGGAGCTTAATCGCGAAGGATTTCAGGGCGATAGGGAATGGCTCgcggaagttagctatttaggtcaattcagtcaccccaatctggtgaagctcattggatattgctgtgaggacgagcaccggttgttggtctatgaatacatggcaagtgggagcttggagaagcatctttTTCGCAGAGTGGGCTCAACGTTGACTTGGTCCAAACGAATGAAAATTGCTTTACATGCTGCAAGAGGGCTTGCTTTTCTTCATGGTGCAGAAAGGCCTATCATATATCGTGACTTCAAGACTTCAAATATCTTAATAGATGCGGATTTCAATGCGAAGCTTTCAGATTTTGGCCTTGCAAAGGATGGGCCGATGGGGGACCAAACCCATGTCTCAACACGAGTAATGGGCACATATGGATATGCTGCTCCTGAGTATGTCATGACCGGGCATTTGACAGCTCGAAGTGATGTTTACGGTTTTGGGGTGGTGCTACTTGAAATGCTTATTGGTAGGAGAGCATTAGACAAGAGCAGGCCCAGCCGAGAGCACAACTTGGTTGAGTGGGCCCGCCCTCTATTAAATCATAATAAGAAACTTCTGAAAATTTTAGACCCAAAACTAGAGGGGCAATATTCAAGTAAAACTGCAATAAAGGTGGCCCAGTTAGCCTACCAATGCCTTAGCCAAAACCCGAAAGGCAGACCGCTAATGAGCCAGGTTGTTGAAATTCTCGAAAACTTTCAGTCAAAGGGGGAAAATGGCGAAGATGAAATTCTTCAGAATGGCGGTACCAGTATAACCCTTTATGAGGTTCCCAAGGGCAGCAATGACCCTCCATCTTAG | 1152 | 0.4149 | MGMCFSIEDEKRLSVSDTSAKPKPAGSADRESGAPLVSSSMNIKDLRKSAGHCNVDIFTYEELRLATKHFRPDFILGEGGFGVVYKGVIDDSVRSGYKTIEVAIKELNREGFQGDREWLAEVSYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRVGSTLTWSKRMKIALHAARGLAFLHGAERPIIYRDFKTSNILIDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLEMLIGRRALDKSRPSREHNLVEWARPLLNHNKKLLKILDPKLEGQYSSKTAIKVAQLAYQCLSQNPKGRPLMSQVVEILENFQSKGENGEDEILQNGGTSITLYEVPKGSNDPPS | 383 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca09g02554 | 383 | SUPERFAMILY | Protein kinase-like (PK-like) | 52 | 348 | IPR011009 | - | |
Cca09g02554 | 383 | Gene3D | Phosphorylase Kinase; domain 1 | 44 | 152 | - | - | |
Cca09g02554 | 383 | CDD | STKc_IRAK | 76 | 350 | - | - | |
Cca09g02554 | 383 | Pfam | Protein tyrosine and serine/threonine kinase | 76 | 347 | IPR001245 | GO:0004672|GO:0006468 | |
Cca09g02554 | 383 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 196 | 208 | IPR008271 | GO:0004672|GO:0006468 | |
Cca09g02554 | 383 | PANTHER | OS01G0588500 PROTEIN-RELATED | 30 | 378 | - | - | |
Cca09g02554 | 383 | Gene3D | Transferase(Phosphotransferase) domain 1 | 153 | 368 | - | - | |
Cca09g02554 | 383 | ProSiteProfiles | Protein kinase domain profile. | 70 | 350 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca09g02554 | 383 | MobiDBLite | consensus disorder prediction | 15 | 36 | - | - | |
Cca09g02554 | 383 | MobiDBLite | consensus disorder prediction | 355 | 383 | - | - | |
Cca09g02554 | 383 | MobiDBLite | consensus disorder prediction | 356 | 374 | - | - | |
Cca09g02554 | 383 | ProSitePatterns | Protein kinases ATP-binding region signature. | 76 | 105 | IPR017441 | GO:0005524 | |
Cca09g02554 | 383 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL17-RELATED | 30 | 378 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca09g02554 | Cca-Chr9 | 51110337 | 51115081 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca09g02554 | 58 | 347 | Glycoside Hydrolase | AT3G07070 | 51.877 | 1.94e-101 | 305 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Cca09g02554 | PK_Tyr_Ser-Thr | 1.6e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca09g02554 | - | - | gmx:100800465 | 695.656 |