Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02552 ATGAAATATTCTTGGAACGTAGCTTGTGAAGTAATGAGAATTGCTCCTCCGCTTCAAGGAGGTTTCAGGGAAGCCATCAATGACTTTATTTTCAATGGGTTCTCAATTCCAAAGGGATGGAAGTTGTATTGGAGTGCAAATTCTACACATAAAAATCCAGAATACTTTCCAGAGCCAGAGAAATTCGATCCAAGTAGATTTGAAGGAAATGGACCTGCACCTTATACTTTCGTACCATTTGGTGGGGGACCAAGGATGTGCCCAGGAAAAGAGTATGCTAGATTGGAAATATTGGTTTTCATGCACAACCTAGTGAAGAGGTTCAAGTGGCAAAAACTGATTCCAGATGAGAAGATCATCGTTGATCCCTTGCCCATACCTGCAAAGAACCTCCCAATTCGTCTTTATCCTCACGAACCCTGA 423 0.4184 MKYSWNVACEVMRIAPPLQGGFREAINDFIFNGFSIPKGWKLYWSANSTHKNPEYFPEPEKFDPSRFEGNGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWQKLIPDEKIIVDPLPIPAKNLPIRLYPHEP 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02552 140 PANTHER CYTOCHROME P450 26 1 136 - -
Cca09g02552 140 Pfam Cytochrome P450 1 112 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02552 140 SUPERFAMILY Cytochrome P450 1 137 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02552 140 PRINTS E-class P450 group I signature 45 69 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02552 140 PRINTS E-class P450 group I signature 77 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02552 140 PRINTS E-class P450 group I signature 87 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02552 140 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 80 89 IPR017972 GO:0005506|GO:0016705
Cca09g02552 140 Gene3D Cytochrome P450 1 137 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02552 140 PANTHER P450, PUTATIVE-RELATED 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02552 Cca-Chr9 51058488 51059107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02552 1 139 Cytochrome P450 AT3G19270 44.604 2.54e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02552 K20667 - ccaj:109799754 307.76