Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02545 ATGGGTGCAACAGCAACAGCAACGCACTGTGACATGGCCGTCACGCCGTCAACCCCTCTCCTCTCCTTCCTCCAACGCCTCCAACAAACGGCGTTCGAAACCCTCGGCGCCGCTTCCGACTTCGATCCCAAGACCTACGTGGACCTGCCTCTCAACTTCTCCCTCTCCGACACCCAAAGCGCCTTCCAGAACCTTCCGAGGAGCGCCAACGGCTCCGTCCCCGTCCAGAGCCTCAAGCGCTTTCTACAAGCGTTCTTCGGAGGCGCAGGGGACGATCTCCTGTACCTGGACCCACCGGATTTCGTCCCCGACCCCGTGGGCTTCTTGCCCAAGGTGAAGCACCCCCTCGTCAGGGCCTGGGCCTTGCAGCTCCATTCGCTCTGGAAAAACTTGACGCGCCAAATATCCCCTGCGGTGCAGGCGCACCCGCACTTGCATACGCTGCTCCCTCTCCCTGCTTCTCTTGTCATTCCCGGCTCGCGTTTTCGCGAGGTTTATTACTGGGATTCCTATTGGGTAATTAGGGGCCTGCTGGCCAGTAAAATGCACCACACTGCTACGGCCATTGTCACCAATCTCATTTCCTTGATAGAGGAATATGGCTTTGTTCTTAATGGGGCTAGAGCATACTACACTAACAGGAGCCAGCCTCCCCTTTTAAGCGCTATGATTTATGAGATATACGGTAGCACGGGTGACATGCAATTGGTTAAAAGATCTCTACCTGCACTATTGAAAGAGTATGAATTTTGGAATTCAGATATACATAAAGTGACCGTTTTGGATGCTCAAGGTTGCACTCACATCTTAAATCGTTATAATGCGATGTGGGACAAACCCAGGCCAGAATCATCCATAATGGACGAGGCATCTGCTTCCAATTTCTCGAGTGTTTCAGAAAAACAACAGTTTTACCGTGATGTGGCATCAGCTGCTGAATCAGGATGGGATTTCAGCACCAGATGGATGAGAAACCCGCCTAATTTCACAACAATGGCTACAACATCTGTGGTACCTGTTGACTTGAATGCATTTCTACTCGGGATGGAGCTCAATATTGCCTTCTTTGCAAAAGTTACTGGAGATAATAGCAATGCTGAGCGTTTCCTGGAAATTTCTGATCATAGAAAAAAGGCAATGAACTCTGTTTTCTGGAATGCAAACAAGAAACAATGGCTTGATTACTGGCTCAGCAATAAATGTGAGGATGTTCATGTTTGGGAAAGCGGGCACCAGAATCAAAATGTATTTGCTTCCAATTTTGTTCCCTTGTGGATGAAGCCATTTTACTCAGATACTTCACTTGTGGGTAGTGTTGTTGAAAGTCTCAAAACTTCTGGCCTGATCCGTGCTGCTGGATTTGCAACTTCTTTAACTGATTCAGGACAACAGTGGGACTTTCCGAATGGGTGGGCTCCACTTCAACATATGCTAGTGGAAGGCCTGCTAAAATCAGGGTTGAAAGAAGCTAGGTCATTGGCTGAGGAAATTGCCATCAGATGGATCACAACCAACTATATTGTTTACAAGAAAACAGGTGTAATGCATGAAAAGTATAACGTAGAGCGTTGTGGAGAATTTGGAGGTGGGGGCGAATATGTACCCCAGACTGGTTTTGGCTGGTCAAATGGAGTTGTCTTGGCATTCTTGGAGGAGTTTGGATGGCCTGAAGATCGGAACATAGAATGCTGA 1692 0.4835 MGATATATHCDMAVTPSTPLLSFLQRLQQTAFETLGAASDFDPKTYVDLPLNFSLSDTQSAFQNLPRSANGSVPVQSLKRFLQAFFGGAGDDLLYLDPPDFVPDPVGFLPKVKHPLVRAWALQLHSLWKNLTRQISPAVQAHPHLHTLLPLPASLVIPGSRFREVYYWDSYWVIRGLLASKMHHTATAIVTNLISLIEEYGFVLNGARAYYTNRSQPPLLSAMIYEIYGSTGDMQLVKRSLPALLKEYEFWNSDIHKVTVLDAQGCTHILNRYNAMWDKPRPESSIMDEASASNFSSVSEKQQFYRDVASAAESGWDFSTRWMRNPPNFTTMATTSVVPVDLNAFLLGMELNIAFFAKVTGDNSNAERFLEISDHRKKAMNSVFWNANKKQWLDYWLSNKCEDVHVWESGHQNQNVFASNFVPLWMKPFYSDTSLVGSVVESLKTSGLIRAAGFATSLTDSGQQWDFPNGWAPLQHMLVEGLLKSGLKEARSLAEEIAIRWITTNYIVYKKTGVMHEKYNVERCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDRNIEC 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02545 563 ProSitePatterns Trehalase signature 2. 464 473 IPR018232 GO:0004555|GO:0005991
Cca09g02545 563 Pfam Trehalase 41 554 IPR001661 GO:0004555|GO:0005991
Cca09g02545 563 PANTHER TREHALASE 6 563 IPR001661 GO:0004555|GO:0005991
Cca09g02545 563 PRINTS Glycosyl hydrolase family 37 signature 200 218 IPR001661 GO:0004555|GO:0005991
Cca09g02545 563 PRINTS Glycosyl hydrolase family 37 signature 270 287 IPR001661 GO:0004555|GO:0005991
Cca09g02545 563 PRINTS Glycosyl hydrolase family 37 signature 305 322 IPR001661 GO:0004555|GO:0005991
Cca09g02545 563 PRINTS Glycosyl hydrolase family 37 signature 337 354 IPR001661 GO:0004555|GO:0005991
Cca09g02545 563 PRINTS Glycosyl hydrolase family 37 signature 380 396 IPR001661 GO:0004555|GO:0005991
Cca09g02545 563 PRINTS Glycosyl hydrolase family 37 signature 457 473 IPR001661 GO:0004555|GO:0005991
Cca09g02545 563 PRINTS Glycosyl hydrolase family 37 signature 537 550 IPR001661 GO:0004555|GO:0005991
Cca09g02545 563 PANTHER TREHALASE 6 563 - -
Cca09g02545 563 SUPERFAMILY Six-hairpin glycosidases 38 556 IPR008928 GO:0005975
Cca09g02545 563 Gene3D - 32 561 IPR012341 GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02545 14 563 Trehalose Biosynthesis Gene Families AT4G24040 60.036 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02545 K01194 - gmx:547539 973