Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02529 ATGGATTCTGAAACGAAAGAAAGAATCGAGGAAACTGTTCGCAGGATTTTGCAAGAATCGGACATGGACGAGGTTACTGAGCACAAGATTCGAAAGCAGGCCTCTCAACAACTTGCCCTCGACCTTTCTCTGCCCCATTTCAAAGCCTTCGTCAGACaagttgtggaggcttttctccaagagaagcaacaacagcagcaacaagaagacgatgatgatgatgatgatgatgaAGaagaagaagaacaacaacaacaacaaGGAGTTTCCAAGGGCAAGGAGTACAATGACGATGGCGATCTCATCATTTGCAGGCTTTCAGATAAGAGAAAGGTGACGATTCAGGATTTCAGAGGGAAAACGTTGGTCTCCATTCGGGAGTATTATAAAAAGGATGGCAAGGAGCTTCCTACTTCCAAAGGAATAAGTTTGACAGAGGAGCAGTGGTCAGCCTTTAAGAAGAATGTGCCTGCCATAGAGAAAGCCATCAAGAAAATGGAGTCACGCTATTAA 513 0.3626 MDSETKERIEETVRRILQESDMDEVTEHKIRKQASQQLALDLSLPHFKAFVRQVVEAFLQEKQQQQQQEDDDDDDDDEEEEEQQQQQGVSKGKEYNDDGDLIICRLSDKRKVTIQDFRGKTLVSIREYYKKDGKELPTSKGISLTEEQWSAFKKNVPAIEKAIKKMESRY 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02529 170 Gene3D - 2 62 - -
Cca09g02529 170 Pfam Transcriptional Coactivator p15 (PC4) 104 155 IPR003173 GO:0003677|GO:0006355
Cca09g02529 170 SUPERFAMILY DEK C-terminal domain 5 60 - -
Cca09g02529 170 MobiDBLite consensus disorder prediction 61 96 - -
Cca09g02529 170 Pfam DEK C terminal domain 4 59 IPR014876 -
Cca09g02529 170 Gene3D Transcriptional Coactivator Pc4; Chain A 92 169 IPR009044 GO:0003677|GO:0006355
Cca09g02529 170 MobiDBLite consensus disorder prediction 67 83 - -
Cca09g02529 170 SUPERFAMILY ssDNA-binding transcriptional regulator domain 103 165 IPR009044 GO:0003677|GO:0006355
Cca09g02529 170 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 3 169 IPR045125 GO:0003713|GO:0060261
Cca09g02529 170 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 3 169 - -
Cca09g02529 170 PIRSF RNA_polymII_KELP 1 170 IPR017415 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02529 Cca-Chr9 50799688 50802210 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Cca09g02529 DEK_C 1.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02529 K25815 - gmx:100305633 234.958