Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02503 ATGGAGAATGAATGGAGCTGGGAGCAGAACACGCTCATCAATGAGTTAATTCAAGGGATGGAGGTAGCAAGGAAGTTGAAGGCGGACTTGAGGACGCCGTATTCGGCCGGCACAAGAGATTTACTGGTGCAGAGGATATTATCTTCTTATGAAAAGGCTCTACTAATTCTAAGATGCAATGCATCAACTTCCGAGTTGCAGGCCATGAGTCAAGCAACAGCGACTCGGTTACCAGAGTCCCCATTGTCTGTTCATGGAAGTCCTTTGAGTGAGGACGTTGATGGGACCATCAAGGATCACCAGGAAGTTAAACATGATTCAAAGAAAAGAAAGACAATGCCCAAATGGATGGACCAAGTAAGAGTGAGCTGCGAGAGTGGTCTTGAAGGACCACATGAAGATGGCTACAACTGGAGAAAATATGGTCAGAAAGACATCCTTGGTGCCAAATATCCAAGAAGTTACTATAGGTGCACCTTCCGCAACACTCAGGGCTGTTGGGCCACAAAACAAGTACAGAGGTCAGATGAAGATCCTACAATATTTGACATAACTTACAGAGGAAAGCATACCTGTTCCCAGGGAAACAATGCTGTTATGCCACCTAAGTCACCAGACAAACAAGAGAAACCACACAGTCATAACATTGATATTCACCATGCACAGGCATCACATGAAAGCCTTACAAAGTTCAGAAACATCTTGGCTGTCAGCACAGATAAATTGGACAGTGGAGATATGACCTATCCTTTCACTTTCCCTTCAACTTCATTTGGATGCATGCAACAAGAAAACCACAGCTTGATTCCTTCATCCCTAGGGAACGAATCCTTCTTGAGTGACCTATACCAAACACACCTGTTATCTCCAACTACACCAGAATCACACTACTTCTCATCTCCAACTTTCCAGATGAATGAGTTTGATGGGATCTATAACAAGCCGAATTCGGATTCTGAAGTTAATGAGATCATTTCCACCAACACATCAGCAACCAATTCTCCAATTCCCGATTTCAATTTCTCACTTGATCCAGTGGAAATTGATCCAAATTTCCCTTTTAATACCCCAGGATTTTTCTCTTGA 1086 0.4319 MENEWSWEQNTLINELIQGMEVARKLKADLRTPYSAGTRDLLVQRILSSYEKALLILRCNASTSELQAMSQATATRLPESPLSVHGSPLSEDVDGTIKDHQEVKHDSKKRKTMPKWMDQVRVSCESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYRGKHTCSQGNNAVMPPKSPDKQEKPHSHNIDIHHAQASHESLTKFRNILAVSTDKLDSGDMTYPFTFPSTSFGCMQQENHSLIPSSLGNESFLSDLYQTHLLSPTTPESHYFSSPTFQMNEFDGIYNKPNSDSEVNEIISTNTSATNSPIPDFNFSLDPVEIDPNFPFNTPGFFS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02503 361 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca09g02503 361 Pfam WRKY DNA -binding domain 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca09g02503 361 SUPERFAMILY WRKY DNA-binding domain 131 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca09g02503 361 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca09g02503 361 Gene3D WRKY domain 118 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca09g02503 361 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 357 - -
Cca09g02503 361 MobiDBLite consensus disorder prediction 193 212 - -
Cca09g02503 361 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 357 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02503 Cca-Chr9 50548229 50549513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02503 6 264 WRKY Transcription Factor Family AT4G23810 45.070 1.25e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Cca09g02503 WRKY 8.3e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02503 - - gmx:100815760 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01849 06 33886761 33887991 Cca09g02503 09 50548229 50549513 PCT