Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02491 ATGGCCGTGAAAATGCACCTTAGTTTCTTCATCTTCGCCACGATTGGCAGCATGCAATTGGTATCTGTGAGTTCCACAACTCATATTGTGGGAGACAATTTGGGTTGGAATGTGCCCAACAGCCCAACGTTCTACAAGGAATGGGCCCAAAACAGAACCTTCGTTGTTGGTGACGTTCTTCTTTTCCAGTACAACCCGGGACTGAACACGGTGATTCTTGTAGAAAAAAGCGATTACGACAGTTGCACAACCAAAAAAATCCTCCACACGTATTTCAGAGGGAACTCGAGTGTTACTTTGGATAGGGTTGGGGACTATTATTTCTTCTCTTCCGTTGGAATGCATTGCGAGTTTGGCCAAAAGCTCCATGTTGATGTTGTTGCTCCATCAACCATATCCTCTCATTAA 408 0.4461 MAVKMHLSFFIFATIGSMQLVSVSSTTHIVGDNLGWNVPNSPTFYKEWAQNRTFVVGDVLLFQYNPGLNTVILVEKSDYDSCTTKKILHTYFRGNSSVTLDRVGDYYFFSSVGMHCEFGQKLHVDVVAPSTISSH 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02491 135 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 2 126 - -
Cca09g02491 135 Pfam Plastocyanin-like domain 36 120 IPR003245 GO:0009055
Cca09g02491 135 Gene3D - 26 134 IPR008972 -
Cca09g02491 135 ProSiteProfiles Phytocyanin domain profile. 26 128 IPR003245 GO:0009055
Cca09g02491 135 PANTHER BLUE COPPER PROTEIN 2 126 IPR039391 GO:0009055
Cca09g02491 135 SUPERFAMILY Cupredoxins 25 127 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02491 Cca-Chr9 50462955 50463850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02491 11 129 Phytocyanin Superfamily AT2G25060 39.167 2.06e-24 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02491 - - gmx:102660389 204.527