Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02480 ATGTTATACGGTGATAAGTTTGAGTCCAACTTTAAGATGCCGCAATCCTTTATGTCCTTTGAATTAAAGAAGCTGCCGTACGCTCACTACGAACACGCGCCTCTTCATCACTCTCTCTTCATTGTCTCCTGTCGGCCTCCTCCGTTCACTCTCTCTCTCACCGGATTTCAAAACCCTACAACCGCTTCTTTAACCCCAAATCAAATCCAGCGCTCGGTGTTTGGTATTCGGCTGCTGTCTTCTCCTAGCCGGCATGCCAAATTTGGTCGCAACCATGTTTATTCTGGCAGATGTTCCAGTTCTAACCATGTGGTTCGTTGTGAACAGGATGATTGCTTGCATGGTGGGTTTTGGAGGGAGTCAGATCTCGATTTGTCAGCGGAGATTTTGGGCAATTCTATGCAAGCTGAAGGAAGGGGAGGTGATCATCACGGTACAGATACCATCTTACGGCTTGATTCCCCTGGACCTGGTTCTTCAATTCCCTCCTATGTGTCCTCTTCCAAGGGAACAAAAAGGAAGTGGGATTTAATTGATGGATGCAAGGGTCAGAGAGTTGACTCTTCTTTGTCCCTTGGGCTTGGGCGTTCAACCAGTTCCTCAGACAGCAAGGGGAGTTCAGCTGCTGCGTGCACTGCTATGTCTTCAGCCAAAGATACTGATGAGGAATCATCTATGGATATTGAACTGAACTTTTCTCTTCATCTTGGCAGTGATAAGGTACAGAGCATGAAGAAGCCTGTTAATTCAAATTTGAAGACATTGGAGCTGCAGCCGAAATTTGATTTGGAGCTGAGCCTTTCCACCGGGCCATGTGAGTCAGATATTACAAGCGTTAATCTAAATCCATCACCTCTTCAATTGAATATGGAGATGCCATTTGCATTCAATGGGACACAAAATACAGATGAGGGATCAACTTCATGTAGTTGGAAGTCAGGGATTGTTCTGCCATCATCAAATACTGACCAAAAAGTTCAGGCACCTGTACTTCCGGGCTTACACAGCAGCAACAGCCACTACCTCGCCATAGTAATTCTAAAACGTGTCAAGTGGAGGGATGTGGAAAGGGTGCCAGAGGTGCTTCTGGACGATGTATATCTCATGGTGGGGGTAGGAGGTGTCAGAAACCTGGCTGTCACAAGGGAGCAGAGGGTCGTACAGTGTACTGCAAGGCACATGGAGGTGGCAGGCGATGTGAATTCCTTGGTTGCACAAAGAGTGCAGAAGGACGGACAGATTTCTGCATTGCCCATGGTGGTGGCCGGAGATGCAGTCATGAAAGTTGTACCCGGGCTGCCAGAGGGAAATCTGGATTGTGCATCCGGCATGGTGGTGGCAAGAGGTGCCAGAGAGAAAATTGCACCAAGAGTGCAGAAGGCCTATCAGGTCTTTGCATCTCACATGGTGGAGGGCGTAGATGCCAAGCTCCTGGTTGTACAAAAGGGGCACAGGGAAGCACAATGTTTTGCAAAGCACACGGTGGGGGGAAACGGTGTACAGCACCAGGGTGCACCAAAGGTGCTGAGGGGAGCACCCCCTTTTGCAAGGGCCATGGAGGAGGAAAACGCTGTACATACCAGGGTGGTGGAGTTTGCACTAAAAGTGTACACGGAGGCACCAACTTCTGTGTGGCACATGGGGGTGGAAAGAGGTGTGCTGTACCAGGCTGCACAAAGAGTGCTAGAGGAAGGACTGATCATTGTGTCCGCCATGGGGGAGGCAAGAGATGCAAGTTTGAAGGCTGTGGAAAGAGTGCACAAGGAAGCACTGACTTTTGCAAAGCACATGGGGGAGGTAAAAGATGCTCTTGGGGCCATCCTGGTTCAGAATATGGCATCGAACAGGATGGTCCTTGCAATTCTTTTGCAAGGGGGAAAACAGGATCCTCATTCGAGTAAACCAGATGAACTTAAGCAGGTACTCGTTGACAAAAACATGGATATAGACATGATGAAAATGGGGAGTAGTCTAGGCAATGCTGCAACCTGCTCCGACTTCAAACAGTATGAAGCTGCTGCAACTGGTCATGTCTCATCTAGGGAGGGTGGTCACTTGCCAATGTCGGTTGCTGTTCCTGAAGGCAGGGTTCATGGTGGAAGTCTGATGGCAATGCTGACGGGGGGTTCTAGCCGTGGATCATGCAGCGGGAGAGATCTAGTTAGTGAACCATGTGAATCAATCAAAGGTTACCCCGTGCCCCAGAGTTGGATTTAA 2217 0.4908 MLYGDKFESNFKMPQSFMSFELKKLPYAHYEHAPLHHSLFIVSCRPPPFTLSLTGFQNPTTASLTPNQIQRSVFGIRLLSSPSRHAKFGRNHVYSGRCSSSNHVVRCEQDDCLHGGFWRESDLDLSAEILGNSMQAEGRGGDHHGTDTILRLDSPGPGSSIPSYVSSSKGTKRKWDLIDGCKGQRVDSSLSLGLGRSTSSSDSKGSSAAACTAMSSAKDTDEESSMDIELNFSLHLGSDKVQSMKKPVNSNLKTLELQPKFDLELSLSTGPCESDITSVNLNPSPLQLNMEMPFAFNGTQNTDEGSTSCSWKSGIVLPSSNTDQKVQAPVLPGLHSSNSHYLAIVILKRVKWRDVERVPEVLLDDVYLMVGVGGVRNLAVTREQRVVQCTARHMEVAGDVNSLVAQRVQKDGQISALPMVVAGDAVMKVVPGLPEGNLDCASGMVVARGAREKIAPRVQKAYQVFASHMVEGVDAKLLVVQKGHREAQCFAKHTVGGNGVQHQGAPKVLRGAPPFARAMEEENAVHTRVVEFALKVYTEAPTSVWHMGVERGVLYQAAQRVLEEGLIIVSAMGEARDASLKAVERVHKEALTFAKHMGEVKDALGAILVQNMASNRMVLAILLQGGKQDPHSSKPDELKQVLVDKNMDIDMMKMGSSLGNAATCSDFKQYEAAATGHVSSREGGHLPMSVAVPEGRVHGGSLMAMLTGGSSRGSCSGRDLVSEPCESIKGYPVPQSWI 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02480 738 PANTHER EMB|CAB89363.1 126 328 - -
Cca09g02480 738 PANTHER EMB|CAB89363.1 603 716 - -
Cca09g02480 738 PANTHER F22C12.10 603 716 - -
Cca09g02480 738 PANTHER F22C12.10 126 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02480 Cca-Chr9 50313935 50318779 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02480 - - vra:106767049 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01830 06 33704692 33709033 Cca09g02480 09 50313935 50318779 PCT