Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02478 ATGAGCTCAGACGCGAGTAGAGAACGAGGTGCACCAACCGTGGTGGAACTGAAATCTCAATATAAACCACTTTTGTTTTTGGCATACCAGAGTTTAGGCTTTCTTTTTGGTGACTTGAGCTTATCCCCTCTTTATGTATATCAAAGTATATTTTCTGGAAGGCTGAAACAGGTCCAAAATGAGGATGCAATATTTGGCGCATTTTCTTTGATCTTTTGGACTCTTTCAATTATTTCTTTGTTGAAGTATGCCGTTATCATGTTAAGTGCAGATGATAATGGTGAAGGGGGAATTGTTGCTTTGTATTCACACTTGTGTAGAAATGCAAAATTTTGTTTGCTTCCTAATCATCAAGCTTCTGATGAGGAGCTTTCTACATATTATAAACCTGGTTCCTCAAATAGAAATATACCACCCTCGCCTTTGAAAAGATTCATTGAGAAACACAAGAATACAAAAATTGCGTTGCTTATTTTTGTTTTGTTGGGTGCTTGCATGTTAATTTGTGTTGGCGCACTCATGCCTGCCATTTCAGTTCTCTCATGTGTTCAAGGGCTGAAAATTGAAGCAAAGATTACAAACAATAGTACAGTGTCTCTTATTTCTTGCGTTTTACTGATTGGACTCTTTGTTCTACAACACCGTGGCTCCCACAAGGTTGCATTCATGTTTCCTCCTATAATCATCGTATGGTTGTTGTCTATTTTCATGATTGGCATTTACAATGTCATCAAGTGGAATCCAAGAGTATATCAGGCTCTTTCTCCATATTATATGTACAAGTTCTTTAGGCTTACAGGAAAAAATGGTTGGACTAATCTTGGAGGAGTATTTCTGTGTGTTACAGGAACTGAAGCTATGTTTGCAGACCTAGGGTACTATAGGCAAGCACCTGTAAGGGTTGCATTTTATTGTGTCATTTACCCATGTCTAGTTCTTCAATATATGGGGCAGGCGGCTTTTCTTTCAAAGAATTTATCTGCAGTGCCTATAAGCTTTTATGCTTCTATACCAGATTTTCTATTTTGGCCAGTATTTGTGGTGGCTGCTTTGGCAGTAATAGCTGCAAGTCAGGCTGTCATCTCTTCAACATTTTCAATTGTCCAACAATGTCATGCATTTGAATGTTTCCCTCGGGTTAAGGCAGTACATTCCAGAAGGTGGATCAATGGCCAGACATATATACCAGAGATAAACTGGGTTCTTATGATAATCAGCCTGGCTGTGACAGTTGGTCTAGGAGACATGAACCATACAGGATATGCTTATGGGATTGCATATCTGATTGTGGTTTTTGTGACCACATGTTTGACATCACTAGTCATCAACCTTGTATGGCATCAAAGTCTCATTGTCGCCCTGGCATTTGCTTTATTCTTTGGTTCGATAGAGATTCTCTTCCTGTCATCGTATTGCATGAAAATTCCTAAAGGTGGCTGGATTCCACTCGTGCTTTCTGCTGTCTTCATGGTTGTTATGTATGTGTGGCACTATGGTTCTCGGAAAAAGTATGTATTTGACATGCATAACAAAGTTTCAATGAGGTCAATCCTTACATTAGGTCCTAGTCTTGGGATTGTTAGGGTTCCAGGAATGGGCCTTATCTACACTGAATTGGCTACTGGAGTCCCTGCCAGTTTTACTCATTTTTTGTCAAATCTACCAGCTTTCTACCAAGTGGTTGTTTTTGTTTGTGTTAAGACTGTACCTGTGCCTTGCGTGCCACATGTGGAACGTTACCTCATTGGCCGAATTGGTCCCAAATCTTACAGAATGTATCGGTGCATTGTTCGAAATGGGTATAAAGACGTGTATACCCATGATAATGATTTTGAAAATGACCTGGTGATGAGCATAGCAGAATTCATTCAATTAGAAGCAGAGGGTTGTTCTGGAACTGTGGATGGTTCAGTGGATGGCCGGATGGCAGTGGTTAGGACATCTGGGAAGTTTGGGACAAGATTGCGAATGTTGGAATCTGCTGGTTTTGAAGAAGGCAGCAGTGCTGGTCTTCCTGGAGCTTTGACTGTTACTAGCAGTAAATCCCCGACATTAAAGAAGCTGCAGGCCATGTATGAGCATGAATCACCCGAACTCAACACTAGACGACGAATTAAATTTGAATTGCTAAACATAATATATAAAGATCCACGTGTCAAGGAGGAGCTCATGGAACTTGTAGAAGCCAAGCGTGCTGGAGCAGCGTATGTAATCGGTCATTCTCACGTGAAGGCTAAGTGGAATTCATCGTTTGTAAAGAAGTTTGCTATCAACCTCTACTCTTTTCTCCGAAAAAACTGCCGGTCCCCTGCAGTAGGACTAAACATTCCTCAGATTTGTCTGATTAAGGTAGGAATGAATTACCATGTTTAG 2373 0.4054 MSSDASRERGAPTVVELKSQYKPLLFLAYQSLGFLFGDLSLSPLYVYQSIFSGRLKQVQNEDAIFGAFSLIFWTLSIISLLKYAVIMLSADDNGEGGIVALYSHLCRNAKFCLLPNHQASDEELSTYYKPGSSNRNIPPSPLKRFIEKHKNTKIALLIFVLLGACMLICVGALMPAISVLSCVQGLKIEAKITNNSTVSLISCVLLIGLFVLQHRGSHKVAFMFPPIIIVWLLSIFMIGIYNVIKWNPRVYQALSPYYMYKFFRLTGKNGWTNLGGVFLCVTGTEAMFADLGYYRQAPVRVAFYCVIYPCLVLQYMGQAAFLSKNLSAVPISFYASIPDFLFWPVFVVAALAVIAASQAVISSTFSIVQQCHAFECFPRVKAVHSRRWINGQTYIPEINWVLMIISLAVTVGLGDMNHTGYAYGIAYLIVVFVTTCLTSLVINLVWHQSLIVALAFALFFGSIEILFLSSYCMKIPKGGWIPLVLSAVFMVVMYVWHYGSRKKYVFDMHNKVSMRSILTLGPSLGIVRVPGMGLIYTELATGVPASFTHFLSNLPAFYQVVVFVCVKTVPVPCVPHVERYLIGRIGPKSYRMYRCIVRNGYKDVYTHDNDFENDLVMSIAEFIQLEAEGCSGTVDGSVDGRMAVVRTSGKFGTRLRMLESAGFEEGSSAGLPGALTVTSSKSPTLKKLQAMYEHESPELNTRRRIKFELLNIIYKDPRVKEELMELVEAKRAGAAYVIGHSHVKAKWNSSFVKKFAINLYSFLRKNCRSPAVGLNIPQICLIKVGMNYHV 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02478 790 PANTHER POTASSIUM TRANSPORTER 3 17 790 - -
Cca09g02478 790 Pfam K+ potassium transporter 29 603 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca09g02478 790 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 17 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca09g02478 790 TIGRFAM kup: potassium uptake protein 27 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02478 Cca-Chr9 50294163 50302247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02478 14 790 Inorganic Solute Cotransporters AT4G23640 61.617 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02478 K03549 - gmx:100777998 1420.99