Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02469 ATGGACGAGAACGTGCTCGACGATATCATACGGAGGCTCGTTGCGGCGAAGAACGGGAGAACGACGAGGCAGGTGCAGCTTACGGAGGCGGAAATTCGACAGCTCTGTGTTTCCTCCAAGGAGATCTTCCTCAGTCAACCCAATCTTCTCGAACTTGAGGCTCCTATTAAGATTTGTGGAGATGTTCATGGCCAATACTCAGATCTTTTAAGGTTGTTTGAATATGGGGGATACCCACCTGAAGCAAATTATTTATTTCTTGGAGATTATGTTGATCGTGGTAAGCAGAGTATAGAGACAATATGCTTACTTCTTGCGTACAAGATCAAATACAAGGAGAACTTCTTTCTTCTCAGGGGCAACCATGAGTGTGCCTCCATCAACCGAATATATGGTTTCTACGATGAGTGTAAGAGGAGGTTTAATGTTCGCATCTGGAAGACATTTACTGATTGCTTTAACTGTCTACCTGTTGCTGCTCTGATAGATGAGAAGATCCTCTGCATGCATGGTGGACTATCGCCTGATCTTAAAAACTTGGATCAGATACGGAATATTGCTCGTCCTATTGATGTGCCAGATCATGGTCTTCTCTGTGATCTTCTATGGGCTGATCCTGATAAAGATCTTGATGGGTGGGGAGAAAATGACCGAGGTGTGTCATTTACATTTGGGGCTGACAAGGTTGTTGAATTTCTTGAACAACATGATCTTGATCTGATATGCAGAGCTCACCAGGTTGTAGAGGATGGATATGAGTTTTTTGCCAAGCGTCAGCTGGTGACAATATTCTCCGCACCAAATTACTGTGGTGAATTCGATAATGCTGGTGCTATGATGAGTGTGGATGACACCTTGACATGCTCTTTCCAAATACTTAAATCATCTGAAAAGAAAGGGAAAGTTGGATTTGGCAACAACTCATCAAGACCGGGAACTCCACCCCATAAGGTAATAAGATGA 963 0.4351 MDENVLDDIIRRLVAAKNGRTTRQVQLTEAEIRQLCVSSKEIFLSQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRIWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLKNLDQIRNIARPIDVPDHGLLCDLLWADPDKDLDGWGENDRGVSFTFGADKVVEFLEQHDLDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKSSEKKGKVGFGNNSSRPGTPPHKVIR 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02469 320 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 318 - -
Cca09g02469 320 Pfam Calcineurin-like phosphoesterase 55 247 IPR004843 GO:0016787
Cca09g02469 320 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 3 1 318 - -
Cca09g02469 320 SUPERFAMILY Metallo-dependent phosphatases 22 297 IPR029052 -
Cca09g02469 320 Pfam Serine-threonine protein phosphatase N-terminal domain 6 53 IPR031675 -
Cca09g02469 320 SMART pp2a_7 27 297 IPR006186 GO:0016787
Cca09g02469 320 MobiDBLite consensus disorder prediction 301 320 - -
Cca09g02469 320 CDD MPP_PP1_PPKL 5 294 - -
Cca09g02469 320 Gene3D - 1 306 IPR029052 -
Cca09g02469 320 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Cca09g02469 320 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Cca09g02469 320 PRINTS Serine/threonine phosphatase family signature 117 141 IPR006186 GO:0016787
Cca09g02469 320 PRINTS Serine/threonine phosphatase family signature 151 177 IPR006186 GO:0016787
Cca09g02469 320 PRINTS Serine/threonine phosphatase family signature 180 207 IPR006186 GO:0016787
Cca09g02469 320 PRINTS Serine/threonine phosphatase family signature 237 257 IPR006186 GO:0016787
Cca09g02469 320 PRINTS Serine/threonine phosphatase family signature 259 275 IPR006186 GO:0016787
Cca09g02469 320 ProSitePatterns Serine/threonine specific protein phosphatases signature. 118 123 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02469 Cca-Chr9 50190936 50195142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02469 56 240 Calmodulin-binding Proteins AT5G63870 30.000 3.56e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02469 K06269 - gmx:100790490 642.499