Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02459 ATGGCCACAAAAGGGTCAAGCTCTTCTGCTGCTGCTTCAGCTTCAGGGGATGCTAGAATCAAAAGGGTTCTCACCCATGGTGGTAAATATGCACAGTACAATGTGTATGGAAACTTGTTCGAAGTGTCCTCCAAGTACGTGCCTCCTATTCGCCCAATTGGTAGAGGTGTTAATGGCATCGTCTGTGCTGCTGTTAATTCCGAAACACACGAACAAGTTGCTATCAAGAAGATCGGTAACGCATTTGACAATATAATTGATGCTAAGAGGACATTGAGAGAAATCAAGCTCCTTCGTCACATGGACCATGAGAATATAATTGCCATCAAGGATATCATACGACCCCCCAAAAAGGAGACCTTTAATGATGTGTACATTGTTTATGAATTGATGGACACTGATCTTCATCACATAATTCATTCTGACCAGCCTCTTAGTGAAGACCATTGCCAGTACTTCTTATACCAACTGTTACGGGGGCTGAAATATGTGCACTCAGCTAATGTTTTGCACCGTGACCTTAAGCCCAGTAATTTACTAATGAATGCAAACTGCGACCTTAAAATTGGGGACTTCGGTTTGTCAAGGACAACAACTGAAACCGATTTCATGACAGAGTATGTTGTCACAAGATGGTACCGTGCCCCGGAATTGCTCCTTAATTGTTCTGAGTATACCTCTGCAATTGATGTTTGGTCTGTTGGGTGCATACTCGGTGAAATTATGACAAGAGAACCCTTGTTTCCTGGGAAAGACTATGTTCACCAACTAAGGCTTATAACGGAGTTATTAGGTTCACCTGACGATGCAAGCCTTGAATTTCTGCGAAGTGATAATGCCAGAAGATATATTAGACAGCTTCCACAGTACCGGAAGCAAAAATTCTCAGCCAGATTCCCTAACATGTTGCCTGAGGCATTGGACCTGTTAGAAAAGATGCTTATCTTTGATCCAAACAAACGCATTACAGGTATGCACTATTACAATCGTTTTCTTAGTAAATATAAATGA 1011 0.4174 MATKGSSSSAAASASGDARIKRVLTHGGKYAQYNVYGNLFEVSSKYVPPIRPIGRGVNGIVCAAVNSETHEQVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENIIAIKDIIRPPKKETFNDVYIVYELMDTDLHHIIHSDQPLSEDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGLSRTTTETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLEFLRSDNARRYIRQLPQYRKQKFSARFPNMLPEALDLLEKMLIFDPNKRITGMHYYNRFLSKYK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02459 336 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 21 323 - -
Cca09g02459 336 SUPERFAMILY Protein kinase-like (PK-like) 50 325 IPR011009 -
Cca09g02459 336 Gene3D Transferase(Phosphotransferase) domain 1 131 325 - -
Cca09g02459 336 ProSiteProfiles Protein kinase domain profile. 47 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02459 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Cca09g02459 336 Gene3D Phosphorylase Kinase; domain 1 30 130 - -
Cca09g02459 336 Pfam Protein kinase domain 51 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02459 336 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 21 323 - -
Cca09g02459 336 ProSitePatterns Protein kinases ATP-binding region signature. 53 77 IPR017441 GO:0005524
Cca09g02459 336 ProSitePatterns MAP kinase signature. 82 185 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cca09g02459 336 SMART serkin_6 47 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02459 Cca-Chr9 50065418 50068822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02459 6 323 MAP Kinase Gene Family AT4G01370 81.132 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Cca09g02459 Pkinase 1.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02459 - - gmx:100807109 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01814 06 33553074 33556329 Cca09g02459 09 50065418 50068822 PCT