Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02442 ATGATCCTATCCGCAATAGCGGCTTATTTAATATGGTTCACCTTTGTGACTCGCTCCCTCAAGGGTCCACGTGTCTGGCCCCTATTGGGCAGCCTCCCAGGCCTTATCCAACACGCCAGCCGCATGCATGACTGGATCGCCGACAACCTCCGCGCGTGCGGCGGCACGTACCAAACCTGCATCTGTGCCATCCCTTTCCTCGCCCGAAAACAGTGTCTGGTGACAGTCACGTGCGACCCCAAAAACCTGGAGCACATCCTGAAGCTCCGCTTCGACAACTACCCCAAGGGCCCTACGTGGCAGTCCGCATTTCATGATTTGTTAGGCGAGGGTATCTTTAATTCCGATGGTGACACGTGGCTCTTCCAGCGAAAAACTGCCGCGCTGGAATTCACAACGCGCACGCTGCGGCAGGCAATGGGGCGTTGGGTGAACCGAGCCATCAAGAACCGGTTCTGTCCCATTCTAGCCGCGGCTCAGAGGGAGAAGAAGCCGGTGGATCTTCAAGACCTCTTGCTTCGGCTGACGTTTGACAACATATGCGGGTTGGCTTTCGGGCAAGACCCCCAGACTCTAGCCGCGGACCTTCCAGACAACGCTTTCGCTCTCTCGTTCGACAGCGCCACGGAAGCCACTTTACAACGCTTCATTCTGCCAGAAATCATGTGGAAGCTCAAGAGATGGCTTCGACTCGGAATGGAAGTGAGCCTAAGCCGCAGCCTCAAACACATCGACCAATACCTCTCCAACATCATCGAGAACCGCAAACTCGAGCTTCTGAATGGAGGTGGGTCCCTCCACGACGATTTATTATCTCGCTTTATGAGAAAAAAGGAATCCTACTCCAACGAGTTTCTCCAACACGTGGCGCTCAACTTCATCCTCGCTGGACGTGACACGTCATCCGTTGCCCTCAGCTGGTTCTTCTGGCTCTGCATTAAGAACCCGCGCGTGGAGGAAAACATCCTCACCGAACTTTGCACCGTTCTGATGTCCACACGTGGACAAAACATCTCCACCTGGCTGGAGGAGCCCCTCGTGTTCGAGGAGGTGGATCGCTTGGTCTACCTCAAGGCCGCGCTCTCCGAAACGCTGCGTTTGTACCCCTCCGTGCCGGAGGACTCAAAGCACGTGGTGAACGACGACGTTTTGCCGAGTGGAACCTTCGTTCCAGCAGGGTCGGCGGTGACCTATTCCATTTACTCGGTTGGGAGGATGAAGTTCGTTTGGGGAGAGGATTGCCTGGAGTTCAAGCCGGAGCGGTGGCTCTCGCCGGAAGGTGACAAGATTCAGGTTCAGGACTCTTACAAGTTTGTCTCTTTCAACGCGGGACCGAGACTGTGCTTGGGGAAGGACCTGGCGTATCTGCAGATGAAGTCCATCGCGGCCGCAGTGCTCCTCCGCCACCGCCTGGCCGTGGCTCCCGGGCACCGCGTGGAGCAGAAGATGTCGCTGACACTCTTCATGAAGTACGGGCTGAAGGTGAACGTGCTCCCTCGGGATCTCCGCCCGCTGCTGGAAAAGATAACAAGTACTTTGAATGCTAAGTGA 1551 0.5609 MILSAIAAYLIWFTFVTRSLKGPRVWPLLGSLPGLIQHASRMHDWIADNLRACGGTYQTCICAIPFLARKQCLVTVTCDPKNLEHILKLRFDNYPKGPTWQSAFHDLLGEGIFNSDGDTWLFQRKTAALEFTTRTLRQAMGRWVNRAIKNRFCPILAAAQREKKPVDLQDLLLRLTFDNICGLAFGQDPQTLAADLPDNAFALSFDSATEATLQRFILPEIMWKLKRWLRLGMEVSLSRSLKHIDQYLSNIIENRKLELLNGGGSLHDDLLSRFMRKKESYSNEFLQHVALNFILAGRDTSSVALSWFFWLCIKNPRVEENILTELCTVLMSTRGQNISTWLEEPLVFEEVDRLVYLKAALSETLRLYPSVPEDSKHVVNDDVLPSGTFVPAGSAVTYSIYSVGRMKFVWGEDCLEFKPERWLSPEGDKIQVQDSYKFVSFNAGPRLCLGKDLAYLQMKSIAAAVLLRHRLAVAPGHRVEQKMSLTLFMKYGLKVNVLPRDLRPLLEKITSTLNAK 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02442 516 Pfam Cytochrome P450 21 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02442 516 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02442 516 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02442 516 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02442 516 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02442 516 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02442 516 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02442 516 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02442 516 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02442 516 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02442 516 PANTHER CYTOCHROME P450 1 502 - -
Cca09g02442 516 PANTHER CYTOCHROME P450 86A7 1 502 - -
Cca09g02442 516 Gene3D Cytochrome P450 12 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02442 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Cca09g02442 516 SUPERFAMILY Cytochrome P450 13 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02442 Cca-Chr9 49788166 49789716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02442 1 509 Cytochrome P450 AT4G00360 73.879 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02442 K15398 - gmx:121174913 974.541