Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02437 ATGGCGAGAAGATCTCCTCCTCGTGTTAACCAAACGTACGACACAAAATGTACGTGGCGAATGTTTAAAATCTTTAATTTTCGTGAAGGTCATTCTGAGAGGAGATTGGTTTCCAGTAGGAGGCATTTGAATATTCAGGCTAATGCTCCAGGGAATGGAAACTCCAGAAGTAGCTCAGATGTGCTTAGCAAATTTGATGAGAAGAACCTTCAAATTGGTGTAAGTTCCAGAAATAGAAGAGATTGTAGTTGTAAAAGTACCAGCAGCGTGGAGAATGATGAGGCAGCAGATTGGAGAAACGAAGTACTAAAGATGATTGTTGATCAGAGATTCGTCAATAAACATTATGAAGGCAAAGATGGGGCAATTTGTCAGCCTAATCAATTCTTGGATGCTTTACAGATTTTATATTCAAACAAGGAACTCTTCATAAAACTTCTGCAAGATCCAAACTCTCTATTAGTAAAACAGATTCACGACTTCCAGAGTTCTCAAGTGAAAGAACCCTGTCAGCATGCAACGCAAAAAAGGATGAGTAGATTAAATAAACCTCACAATAGTAATGCTACACAATGTGTAGAACCTACCAAGTCCTTTGATAGATATGATTTGAGTTCAAGTTGTAAGCCTCAGTCCTCAGACAGAATAGTAGTTTTGAAGCCTAACACTGTTAATAGTAATGCACAAGATAATAGGCCTCTACGTTTTCCCTTTAGTGGTATAAAGAGAAAATTAAAGCATGTCATGAGAGTAAGGAGACACGAACAGCAGTGGAAGACAGGCGATGGAATGCCATGTAAATTTTCCTGCAGTTCCCAGGACTTGGAAGATGGTAAAAAAGTAAAAGAATTGGAAATTGCTGGAAGAAATTCACCAATTAATGACCATACTAGTGCTGGTAAAAGGTTGAATTCATATCTTGATTTGAAGAAGAGGGACAATATTATCAAGTTGAAGGATTCTGAGTTATGTATGGAGCAGGAAGCTGCTTCATTTTGTTGCAGTAAGACCAAATATAATACTTCAATTGGCCCTTCTGAGCAAAATACATTGAACATACATGTTGAAGGTAGGAAAGGTCCTTCTCAGATGTTAAACTGTGGAATTGAGGAATGTAAACAGTGCACAAACTCTCTAGGGAGATCAATTCCACTTCCTGACCTTTTGTCCTTGCCAAGCTTGCATAGGTACTGTGAGCACAGTTCTATCACTGAAAGAATGAGAGATTACAACAACTATCAAATGGTCACCAGAACCAGATCCGGGCTTCCAAAAGAAGGAGAAAATGGTTCCTATAGTTTTTTGGGACCGAAAATCAAGGATCCCCCAGTGACCATTGTAAATATAAATTCTGATAAGTTGCAACTTTTTGGTGAAGATATTAGTCTCAGAAATAGTGTTCCTGGCTACAATCTACATGCGCATTATGATATTTCAAGAGATGGCAAATTCAAGGATAGCCCTACTCAGAACATCGACCTAAATAATATAATCAGAGGAAGTGGATGTGGATCTTTTCTGGATTTGCATCCAGAGATCCAGGCTTTGCTTTTTTCACAAGATGTTGCTTCATCAAGCCTCACATTCAGTCAGAGAACAAAAGATACTGTAGTCGATGTTAACCACCCCAGTGGTGAATCTGTTGCTGAGCAATTTATTAAGGATGATTTTACCAACCCACCAATCACCATCTTTCAACCAGATGAGCCACCGGTACAAGTAATGCAAGATAAATTTAAAGAGAACCATTTTGAAGACCTTATAAGACTCTCATTGAATCAAATGAACAATTTAACCTCCTCCAAGGACATATTAGACTATGTAAGGAAAATTCTGCATGCTTTCAACTTGAAATGTGATGAACTTACTCAGAAGAGATCATGTGACCAATCACTGGATCCATCCACTTTTGTTGAACTGAAGGAACTAACTCGTCAACTTTCTGGTGGTACAATCTTGCTTGATTGTGTCATCGAAACTTTCACAAATGTATACCAGAACTATGGTTTTCCACCTCATGTTTCAACAAAAAATCCAAACGTCCAAGCATATGTTGTGAAGAAACTTCTGGTTAAAGAGATTACAGAACTAGTTAACTTGCACTTTCACCCTTGTCCATCACCCTTAAGGTTAGAACAGCTTGTTGAAAAGGACTTGGAAAGACGTGGTTCATGGCTAAATATCCAAGTTGACACAGAAGATATTGCAATAGAGGTGGAGAAAGATGTTCTTGAAAATCTGGTATTGGAAATTGCATCTGAGATGGATATCATAACCATGACATATTGCAATGAACCTATGTCTACTTGCTTGGGGGATGATAAAGCATTTTGGAAGGATTATCTAGCTACCATTTATTGA 2361 0.3816 MARRSPPRVNQTYDTKCTWRMFKIFNFREGHSERRLVSSRRHLNIQANAPGNGNSRSSSDVLSKFDEKNLQIGVSSRNRRDCSCKSTSSVENDEAADWRNEVLKMIVDQRFVNKHYEGKDGAICQPNQFLDALQILYSNKELFIKLLQDPNSLLVKQIHDFQSSQVKEPCQHATQKRMSRLNKPHNSNATQCVEPTKSFDRYDLSSSCKPQSSDRIVVLKPNTVNSNAQDNRPLRFPFSGIKRKLKHVMRVRRHEQQWKTGDGMPCKFSCSSQDLEDGKKVKELEIAGRNSPINDHTSAGKRLNSYLDLKKRDNIIKLKDSELCMEQEAASFCCSKTKYNTSIGPSEQNTLNIHVEGRKGPSQMLNCGIEECKQCTNSLGRSIPLPDLLSLPSLHRYCEHSSITERMRDYNNYQMVTRTRSGLPKEGENGSYSFLGPKIKDPPVTIVNINSDKLQLFGEDISLRNSVPGYNLHAHYDISRDGKFKDSPTQNIDLNNIIRGSGCGSFLDLHPEIQALLFSQDVASSSLTFSQRTKDTVVDVNHPSGESVAEQFIKDDFTNPPITIFQPDEPPVQVMQDKFKENHFEDLIRLSLNQMNNLTSSKDILDYVRKILHAFNLKCDELTQKRSCDQSLDPSTFVELKELTRQLSGGTILLDCVIETFTNVYQNYGFPPHVSTKNPNVQAYVVKKLLVKEITELVNLHFHPCPSPLRLEQLVEKDLERRGSWLNIQVDTEDIAIEVEKDVLENLVLEIASEMDIITMTYCNEPMSTCLGDDKAFWKDYLATIY 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02437 786 Pfam Protein of unknown function (DUF3741) 108 152 IPR022212 -
Cca09g02437 786 Pfam Domain of unknown function (DUF4378) 606 750 IPR025486 -
Cca09g02437 786 PANTHER DUF3741 FAMILY PROTEIN 4 99 - -
Cca09g02437 786 PANTHER DUF3741 FAMILY PROTEIN 99 755 - -
Cca09g02437 786 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 4 99 - -
Cca09g02437 786 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 99 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02437 Cca-Chr9 49740832 49746157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02437 348 739 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 26.950 3.42e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02437 - - gmx:100776560 1103.2