Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02432 ATGAGAAAATTGAAAAACGGAGGTCTGGACACTGATTCCTTTTCGTTTCATTGGATTCGATCTCTGTCTTCCCAGGCGCCAGCTTCCTCTCCCACATTGCTTCCCCGAGGTGTAATTAATCAAGGGGAGGGGCGGGTGAAAGGGGGAACTGACAACGTGAATGGGTTTCCTCAGTCAGGTAGCCAGCTTGTGCCTCTGTTGAAGTGGATAAATGCTGTGCTTCCTAACTTTAACCTGCCTTTAGATACTTCAGAGGAGGAGTTGAGGGCATGTTTGAGGGATGGAGCTGTATTATGCAGCATTCTGGACAATCTGGTTCCTGGTTTGGTGAAGGGAAGTGGTTCTTTGAATGAGCTAATCGGTGTGAAAAAGTTTCTAGCAGCTTTGGATGAATTGGGATTGTCTGGATTTGAACTGTCAGACCTGGAGCAGGGATCCATGGTGCCTGTGTTGCAGTGCCTTGAGACTCTGAAAACTCATTTTGCTTATAATGCTGCACGAGAAAATAACCAAAGTTGTTCTAGAAAGAGGTGGGATCAGTCAAATCAAACATTCTTACAGGAAACTGATAGTTGCCTCAAGGATGCTTCAAAATTGCATCATGCTGTTGATGGTTCTGTTGTATTAGATGGAATCGCTTCCGTAGATCATACTGGAATAAAGTCTAATGAACTGTTCCAGTCGAAGCAAGGATTGCATGTAAATTTTTCTGATGCTAAACTTAATGAAGTATTGAAATCAAAAAATTTGGATAGTCTCTCGACTCGATTGCTTTTTAATATAGGAAATAGGATCTTAAGTGATATCTTTGAAAGGAAGAATGGAGATGTACCTCTGGCTCATCGTGCCTCATTCCTGTTGAGGAAGATTCTGCAAGTAATTGAGTTGCGCTTTTCAAATCAAGCAGAAAGCATGAAAAATCAAAACAATCTTTTCAAGGCTCGTGAGGGAAAGTATCAAACAAGAATAAGTGCACTTGAAACCTTGGCCGTAGGGACAACTGAGGAGAATGAGTATGCTTTGCAGGTTGAACAAACTAAATTTGAGGAGAAGAAGAAACTTGAAGAGCAGGATTTTTCTCGATTGAAGAAAGAAAAAGTTCGTAGTGAAATCGAAATTTCTGCATTGAAGCAAGATTTGGAAATAGCCAAAAGAACACATGAAGAACATGTTTCAGAGTTAGAATTGCAAGCTACTGAATCTAAAGCTGAATATGAAAAAAGGATAGAGGAACTTAAACGTCATCTTGCAGATGCAAGAAAGAAAGTCAAGGAACTAGAGGCATTTTCAGAATCCAGATCTTTGAAATGGAAGAATAAAGAGCATACCTATCAAACTATCGTAAATTTCCAATTTGGAGCTTTCAAGGAACTGAAAACTGCCATGAAGTCTATCAAAAATGATGTGGTAAAAACAAAAAGAAACTACTTGGAGGAATTCAAATACTTTGGAATCAAGCTGAAAGGTTTAGCTGAGGCTGCTGAAAATTATCATGTAGTTCTGGCAGAAAATAGGAAATTGTATAATGAGGTTCAAGATTTGAAAGGTAATATAAGGGTATATTGTCGAATCAGACCATTTCTTCCAGGGCAAAGTCAAAGCCATACAGCAATTGAGTTTGTTGGTGATGATGGAGAGCTAATTGTCAGCAATCCTCTTAAACAAGGAAAAGAAAATCGCAAGCTTTTTAAATTTAATAAGGTTTTTGGTCAAGCAACAAGTCAAGAGGAAGTATTCAAGGACACTCAACCACTGATTCGATCTGTTCTTGATGGCTACAATGTTTGTATATTTGCTTATGGTCAAACTGGCTCTGGAAAGACATATACAATGAGTGGACCTGGCCTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCATATCTCCCAGAGTAGAAGAAGCTCTATTATTTATGAAGTTGGAGTTCAAATGGTTGAAATTTATAACGAACAAGTTCGTGATTTACTAACAAGCAACGCATTGTTTACCACTCATTTACTTTTAATTGTTTTGAAGAAAAAATATACCAAGTATTTCCTTGACTTGCACACACTTGGGATTTGGAATACTGCCCAACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGCATTCTGTAAATTCAATGTCAGATGTCCTTGAGTTGATGAATATTGGGTTTACGAATCGGGCAACTAGTGCCACAGCCTTGAATGAAAGGAGTAGTAGATCACACAGTGTTCTCTCTGTTCATGTTCGAGGAACGGATTTGAAGACAAACACACTGTTGCGTGGATGTCTTCATCTTGTAGATCTTGCAGGAAGTGAAAGAGTGGACCGTTCTGAAGCCACCGGAGATAGGCTTAAGGAGGCTCAACATATAAATAAATCACTATCTGCACTAGGAGATGTGATATTTGCTCTATCACAAAAGAGTTCACATGTGCCATATAGAAATAGTAAATTGACCCAACTTCTTCAGAGTTCGTTAGGTGGTCAAGCGAAAACCCTTATGTTTGTACAGCTTAATCCTGATGTTGCTTCATATTCTGAAACTGTAAGCACCTTGAAGTTTGCTGAGAGGGTTTCTGGCGTTGAGTTAGGTGCTGCTCGTAGCAACAAAGAGGGAAGGGATGTGAGAGACCTTATGGAGCAGTTAGGATCTCTCAAGGATGCAATCGCAAGGAAGGATGAAGAGATAGAGCGGTTACACAAGGCTAATCATAATGGTGCAAAGCTTGGTACGATATCAGTCAGACATGGGTCGGCATCTCCAAGGAGACGTTCTGTAGGGACTCCCGGACGTAGCACGAGATTTTCAGGAGCAAGGAGCTTTGGAGTCAATGGAAAAGCAGCTTCTGACATGGATAACAGCTCAGAGTATAGTGATAAGCATTCAGAAGCTGGTTCTCATCAATCAATGGATGATTTCAGGAACAACAGTTCCCTTCGGTTGAAATCAGCCGGAGATGATATGAGTCAAAATTTGAATGAGGACATTGACCTCTTAAGATTTGGAGATGCAGATTCGGAGGAGAGATTAAGTGACATATCTGATGGTGGTCTCTCAATGGGAACCGAAACTGAAGGTTCAATCAGCAGTATTGTTGAGTACACTCTTTTCCCTGAGCTCGATAAGGCAGCTGAAACTACACCAGCAAAGGACACCACAACCAACAACCTTCCAGCTAAGAGCACAGAAAAGCCCATTATGCCATCCAAAATCCCTAGATCTGCTCAAGTCCCACAAAAAGTGCAGACAAGACCTTCTAGGCTATCATTGAACAAAACCTCCTCGAAGGTTCAGTCAAGTGTTAGAAAGCCCACAGCCGGCAGCTCGTCTTCGGTGAAGTCCCTTAAACGATGGCAATATAATGTTATCTGCGATGTTGTATATGTAGCTGAAGTCCTTCTCGCCAGCCGTCGCTCTCATCAAGAGTACCCCATTCGCATAGCTCCCTCGATGTTGCCAATTTTGATTCGGGTGCCATTCTCTTCATTTCCATATCATCACACAAATGAGAAGAGAAATTTAACAGGCCTTTTCTATCCAGACATTTTTGGGCTATCTCCTTCTTGA 3579 0.4093 MRKLKNGGLDTDSFSFHWIRSLSSQAPASSPTLLPRGVINQGEGRVKGGTDNVNGFPQSGSQLVPLLKWINAVLPNFNLPLDTSEEELRACLRDGAVLCSILDNLVPGLVKGSGSLNELIGVKKFLAALDELGLSGFELSDLEQGSMVPVLQCLETLKTHFAYNAARENNQSCSRKRWDQSNQTFLQETDSCLKDASKLHHAVDGSVVLDGIASVDHTGIKSNELFQSKQGLHVNFSDAKLNEVLKSKNLDSLSTRLLFNIGNRILSDIFERKNGDVPLAHRASFLLRKILQVIELRFSNQAESMKNQNNLFKAREGKYQTRISALETLAVGTTEENEYALQVEQTKFEEKKKLEEQDFSRLKKEKVRSEIEISALKQDLEIAKRTHEEHVSELELQATESKAEYEKRIEELKRHLADARKKVKELEAFSESRSLKWKNKEHTYQTIVNFQFGAFKELKTAMKSIKNDVVKTKRNYLEEFKYFGIKLKGLAEAAENYHVVLAENRKLYNEVQDLKGNIRVYCRIRPFLPGQSQSHTAIEFVGDDGELIVSNPLKQGKENRKLFKFNKVFGQATSQEEVFKDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPGLSSKSDWGVNYRALHDLFHISQSRRSSIIYEVGVQMVEIYNEQVRDLLTSNALFTTHLLLIVLKKKYTKYFLDLHTLGIWNTAQPNGLAVPDASMHSVNSMSDVLELMNIGFTNRATSATALNERSSRSHSVLSVHVRGTDLKTNTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALSQKSSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETVSTLKFAERVSGVELGAARSNKEGRDVRDLMEQLGSLKDAIARKDEEIERLHKANHNGAKLGTISVRHGSASPRRRSVGTPGRSTRFSGARSFGVNGKAASDMDNSSEYSDKHSEAGSHQSMDDFRNNSSLRLKSAGDDMSQNLNEDIDLLRFGDADSEERLSDISDGGLSMGTETEGSISSIVEYTLFPELDKAAETTPAKDTTTNNLPAKSTEKPIMPSKIPRSAQVPQKVQTRPSRLSLNKTSSKVQSSVRKPTAGSSSSVKSLKRWQYNVICDVVYVAEVLLASRRSHQEYPIRIAPSMLPILIRVPFSSFPYHHTNEKRNLTGLFYPDIFGLSPS 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02432 1192 Coils Coil 455 475 - -
Cca09g02432 1192 MobiDBLite consensus disorder prediction 973 989 - -
Cca09g02432 1192 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 43 1123 - -
Cca09g02432 1192 MobiDBLite consensus disorder prediction 1051 1066 - -
Cca09g02432 1192 Gene3D Kinesin motor domain 458 867 IPR036961 -
Cca09g02432 1192 Gene3D - 61 164 IPR036872 -
Cca09g02432 1192 SMART kinesin_4 515 873 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02432 1192 PANTHER KINESIN-LIKE PROTEIN KLP-3 43 1123 - -
Cca09g02432 1192 ProSiteProfiles Kinesin motor domain profile. 517 865 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02432 1192 Coils Coil 879 909 - -
Cca09g02432 1192 MobiDBLite consensus disorder prediction 1079 1113 - -
Cca09g02432 1192 Coils Coil 359 429 - -
Cca09g02432 1192 SMART ch_5 62 160 IPR001715 GO:0005515
Cca09g02432 1192 MobiDBLite consensus disorder prediction 957 972 - -
Cca09g02432 1192 PRINTS Kinesin heavy chain signature 766 784 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02432 1192 PRINTS Kinesin heavy chain signature 592 613 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02432 1192 PRINTS Kinesin heavy chain signature 735 752 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02432 1192 PRINTS Kinesin heavy chain signature 815 836 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02432 1192 Pfam Kinesin motor domain 523 863 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca09g02432 1192 SUPERFAMILY Calponin-homology domain, CH-domain 64 164 IPR036872 -
Cca09g02432 1192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 517 903 IPR027417 -
Cca09g02432 1192 MobiDBLite consensus disorder prediction 1048 1113 - -
Cca09g02432 1192 MobiDBLite consensus disorder prediction 906 989 - -
Cca09g02432 1192 MobiDBLite consensus disorder prediction 929 943 - -
Cca09g02432 1192 Pfam Calponin homology (CH) domain 66 161 IPR001715 GO:0005515
Cca09g02432 1192 ProSiteProfiles Calponin homology (CH) domain profile. 60 162 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02432 Cca-Chr9 49681309 49692908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02432 485 865 Calmodulin-binding Proteins AT5G65930 40.731 2.45e-71 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02432 K10406 - gmx:100812813 1814.66