Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02431 ATGTCTGGATGCAATAAATCATCTAAAAATAATCAGCAATCAATCAAATATTGGCGAATTCAACATGGAGGGGCGTCCTCTAAGGCTGATCTTTCTTGTGTAGATTATTCGCCTTCTCTTTCCAACAATGAGAATAAACAATGCTATGGAAGTTCTCAACCAAAGTCCCCTCGGATACTGAGCACAGCTCAGCTCATCTCTGCAATAGGCCAGATATGGGATTCTGCAAGTCGCCCACTTTCGGTTTTACTCCCGAAGGAAAATGTGAATCTGGATGATAAAGGATTTCCGAAAGACAAAATTCTGGGTAGCATTGATGAGAAAAAGAATGAACTGGTATATACTTCAAGTGACACTAATTACCATCCTGTTACCGGGGGCGGTGCCCAGATTGTGCAGGAACAATGGGAGTTCACTAAGGTAAGGCAGAAGATGTTACTACTTGAATCTTCTAAAGAAAGTCAAGATTATATTCATTCTTTATTTCAGAGGCGTTCACAGGCTAGTGATAACAATACAAATAAAGATCGGAAAGAAATGGAACATGAGAGAGAGGAAATGTCATGTAAATCAGGAAATGTATATTGGTGGATAGGTAGGAATTTTACTAAGATGCTAAATTGTCAAGTGAATGTTACCCAGCCTGAGAATCTGGAAACTAATTCTCCAGTTTCTGGGGGTGGCATTTCAATAGATACAAGCACCCCTGCATTGGCTAATGAGAGTGATATGTGCAGTTCTAATTCAATCACACATAAAACTCAATCATTATCTGATGCTGTAATGCAATCAAGAATAGTTAGCTCTTTGTGTTCAGACTATTTTCTTCAAGCTGTGCCTGATACTATGGCAGACATTGGTGCTTGTCATACCCTTTCTTCTAGTATCTGTGCAGACTATCATATTAACTCTTTAGCTTCCTGTGATAGTGCTTCTGATCAGTGCCAACATGAGATTGATGATAATGAATCACTGGAAATCCAAAGAAGACATGTCTTGGATATAACTGATGATGAACCTAAGGTTCAGACATTCTTGGCAACCCATCTGAAGCCTTGTAATTCCCAAGCTAAGCAAAAACATGCTTTTTCTGGGGCGTTAGCTGGTATATGTGTCAGTCTTTGTCTTCACCCTGTTGACACAATTAAGACAGTCATTCAATCTTGCCGTGCTGAACACAGGTCCATCTTTTATATTGGGAAGTCAATTGTTTCTGATAGAGGTTTGCTTGGGCTATATCGTGGAATTACCACTAACATTGCATGTTCAGCACCAATTTCTGCAGTGTATACTGTCTCCTATGAATCAGTTAAAGTAGCTTTGCTTCCTTATCTTCCAAAGGAATATTATTCTTTTGCCCATTGTGTGGGAGGTGGTTGTGCGAGCATTGCCACCTCTTTCATTTTTACTCCTAGTGAACGAATAAAGCAGCAGATGCAAGTTGGTTCTCATTATCGCAACTGCTGGGATGTATTGATTGGAATTATCAGAAATGGTGGTTTATCCTCCCTATATGCTGGTTGGAGAGCTGTGCTATGCCGGAATGTTCCACATTCGATTATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGCCATATAGTACTCAACCCAACACTTTTCAGACTTTAGTGTGCGGAGGATTAGCTGGATCTACTGCTGCTTTATTCACCACTCCTTTTGATGTGATCAAGACTAGATTACAGACACAGCAGATTCCTGGATCAGAAAATCAATATGATAGTGTGCTCCATGCCCTTTACAAAATTAGTAAGAGTGAAGGTTTGAAGGGCCTGTACAGGGGGTTGACTCCGAGATTGATTATGTACATGTCTCAAGGATCACTTTTTTTTGCTTCATATGAATTTTTCAAGAGGGCATTTTCTCTGGAAGCATCACCCGACTAA 1911 0.3993 MSGCNKSSKNNQQSIKYWRIQHGGASSKADLSCVDYSPSLSNNENKQCYGSSQPKSPRILSTAQLISAIGQIWDSASRPLSVLLPKENVNLDDKGFPKDKILGSIDEKKNELVYTSSDTNYHPVTGGGAQIVQEQWEFTKVRQKMLLLESSKESQDYIHSLFQRRSQASDNNTNKDRKEMEHEREEMSCKSGNVYWWIGRNFTKMLNCQVNVTQPENLETNSPVSGGGISIDTSTPALANESDMCSSNSITHKTQSLSDAVMQSRIVSSLCSDYFLQAVPDTMADIGACHTLSSSICADYHINSLASCDSASDQCQHEIDDNESLEIQRRHVLDITDDEPKVQTFLATHLKPCNSQAKQKHAFSGALAGICVSLCLHPVDTIKTVIQSCRAEHRSIFYIGKSIVSDRGLLGLYRGITTNIACSAPISAVYTVSYESVKVALLPYLPKEYYSFAHCVGGGCASIATSFIFTPSERIKQQMQVGSHYRNCWDVLIGIIRNGGLSSLYAGWRAVLCRNVPHSIIKFYTYESLKQVMPYSTQPNTFQTLVCGGLAGSTAALFTTPFDVIKTRLQTQQIPGSENQYDSVLHALYKISKSEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKRAFSLEASPD 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02431 636 ProSiteProfiles Solute carrier (Solcar) repeat profile. 356 440 IPR018108 -
Cca09g02431 636 ProSiteProfiles Solute carrier (Solcar) repeat profile. 539 628 IPR018108 -
Cca09g02431 636 Gene3D Mitochondrial carrier domain 450 635 IPR023395 -
Cca09g02431 636 Gene3D Mitochondrial carrier domain 340 449 IPR023395 -
Cca09g02431 636 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 633 - -
Cca09g02431 636 Pfam Mitochondrial carrier protein 360 441 IPR018108 -
Cca09g02431 636 Pfam Mitochondrial carrier protein 540 630 IPR018108 -
Cca09g02431 636 Pfam Mitochondrial carrier protein 450 533 IPR018108 -
Cca09g02431 636 ProSiteProfiles Solute carrier (Solcar) repeat profile. 449 532 IPR018108 -
Cca09g02431 636 MobiDBLite consensus disorder prediction 170 185 - -
Cca09g02431 636 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 633 - -
Cca09g02431 636 SUPERFAMILY Mitochondrial carrier 359 625 IPR023395 -
Cca09g02431 636 MobiDBLite consensus disorder prediction 163 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02431 Cca-Chr9 49676222 49681286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02431 364 629 Chloroplast and Mitochondria Gene Families AT1G07030 32.852 2.19e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02431 - - gmx:100812271 1078.54