Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02421 ATGCTTAGAGTAAATGGAATAGATTTTGAGGAGATCAAAGTCGATTTATCCAAACGCCAGCATTTATCTTCCGAATTCCGAGCGATTAACCCTTTAAGGAAAATCCCTGCTATTGTTGATGGAAGGTTTAAGCTATTTGAGAGTCATGCTATTCTCATATATCTTGCTTCTGCATTTCCGGGAGTTGCAGACAATTGGTACCCGGCTGACCTTTCCAGGAGAGCGAGAATTCACTCTCTGTTAGATTGGCATCACCTGAATTTGCGTCGTGGGGCAGCCACATTTGTTTTAAATACTGTTCTAGCTCCACTATTGGGCCTACCACAAAACCAACAAGCAGCTGCTGAAGCTGAGAAAATTCTGGTTTCATCTTTGTCAACAATAGAGAACATTTGGCTTAAGGGGGACGGACAGTACTTGCTTGGTGGTTTGCGACCATCCATAGCAGATCTCAGTCTGGTTTGTGAAATTATGCAGTTAGAGCTTTTAGATGGGAAGGACCGTGATCGTATTTTGGGCCCGCACAAGAAAGTTCAGCAGTGGATTGAGAGCACAAGAAATGCAACAAGGCCTCATTTTGATGAAGTTCACAATGTCCTCTATAAGCTCAAAACCAAGCTTTCAGAGCAGAAGTCTAGAACCCCGCTATCTTCAAAGATGTGA 663 0.4314 MLRVNGIDFEEIKVDLSKRQHLSSEFRAINPLRKIPAIVDGRFKLFESHAILIYLASAFPGVADNWYPADLSRRARIHSLLDWHHLNLRRGAATFVLNTVLAPLLGLPQNQQAAAEAEKILVSSLSTIENIWLKGDGQYLLGGLRPSIADLSLVCEIMQLELLDGKDRDRILGPHKKVQQWIESTRNATRPHFDEVHNVLYKLKTKLSEQKSRTPLSSKM 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02421 220 Gene3D Glutaredoxin 1 63 - -
Cca09g02421 220 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 3 214 IPR043377 -
Cca09g02421 220 CDD GST_C_Theta 73 203 IPR040077 -
Cca09g02421 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 63 IPR004045 -
Cca09g02421 220 SUPERFAMILY GST C-terminal domain-like 64 198 IPR036282 -
Cca09g02421 220 Gene3D - 64 220 - -
Cca09g02421 220 SFLD Glutathione Transferase (cytosolic) 2 185 IPR040079 -
Cca09g02421 220 SUPERFAMILY Thioredoxin-like 1 68 IPR036249 -
Cca09g02421 220 Pfam Glutathione S-transferase, N-terminal domain 2 56 IPR004045 -
Cca09g02421 220 SFLD Main (cytGST) 2 185 - -
Cca09g02421 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 70 216 IPR010987 -
Cca09g02421 220 Pfam Glutathione S-transferase, C-terminal domain 111 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02421 Cca-Chr9 49575858 49583195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02421 3 217 Glutathione S-transferase Gene Family AT5G41210 65.581 1.17e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02421 K00799 - gmx:547979 395.971