Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02420 ATGATGGGGAAACTGAAGGTGTATGCTGATCGAATGTCCCAGCCTTCTCGTGCAGTTCTCATATTCTGCAGGTTTAACGGAATTGACTTTGAGGAGATCAAAGTAGACATTTCCAAACGCCACCACCTCTCTCCTGAATTCAGAGAAGTAAACCCTTTGCAGAAAGTTCCGGCAATTGTTCATGGAAGCTTCAATCTCTCCGAGAGCCATGCAATCCTTGTCTATTTAGCTTCTGCTTTTCCTGGAATTGCTGACCATTGGTATCCAAGTGATATTTTCAGGAGAGCCAAAATTAACTTAGTACTGGATTGGCATCACTCTAATTTACGACATGGAGCAGTGAACTATGTTCTAGATACTGTACTAGGACCTGCAACTGGCCGTCCACTTAATCCAAAAGCAGCTTCTGAAGCAGAGAAAGTTCTATTGTCTTCTTTAACAAAACTAGAGTATATATGGCTCAATGGAGAGGGATGCTTCCTGCTTGGTGGCTCTCAGCCATCTATAGCAGATCTCAGCATGGTTTGTGAACTCATGCAACTTGAGGTAACTAAATGTGACTTAATAATTATTGATGCCGCATCCGACTAA 591 0.4247 MMGKLKVYADRMSQPSRAVLIFCRFNGIDFEEIKVDISKRHHLSPEFREVNPLQKVPAIVHGSFNLSESHAILVYLASAFPGIADHWYPSDIFRRAKINLVLDWHHSNLRHGAVNYVLDTVLGPATGRPLNPKAASEAEKVLLSSLTKLEYIWLNGEGCFLLGGSQPSIADLSMVCELMQLEVTKCDLIIIDAASD 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02420 196 Gene3D - 84 192 - -
Cca09g02420 196 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Cca09g02420 196 SUPERFAMILY Thioredoxin-like 2 89 IPR036249 -
Cca09g02420 196 CDD GST_N_Theta 5 80 IPR040075 -
Cca09g02420 196 SUPERFAMILY GST C-terminal domain-like 85 188 IPR036282 -
Cca09g02420 196 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Cca09g02420 196 SFLD Glutathione Transferase (cytosolic) 5 184 IPR040079 -
Cca09g02420 196 SFLD Main (cytGST) 5 184 - -
Cca09g02420 196 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 196 IPR010987 -
Cca09g02420 196 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 184 IPR043377 -
Cca09g02420 196 Gene3D Glutaredoxin 4 83 - -
Cca09g02420 196 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02420 Cca-Chr9 49571167 49574379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02420 2 183 Glutathione S-transferase Gene Family AT5G41210 68.132 9.62e-94 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02420 K00799 - gmx:100799229 345.895