Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02384 ATGGAGTTTGTGAAGAAGTGTAAGAAAGTATTGGGTAGCAAGAGATTGCACGCTGAAGAGAATGAAAGTGGTAAGTTGACAAACGAGGAAAAGCAACATTATGAGAAGAAGAATATGCATCGTGTGGCTCCAAAAGGTTGCATTTATGTATACGTTGGACCCAATAGCGAGAGATTCCTAATGAAGATAAAGATGGTAAACCACCCTTTGTTCAAGAAGCTTTTGGGTGAGAGTGAGAGAgaatatgaatatgattcatatgaatatgggtatagaaACGATGGTCCCTTATGGATCCCTTGCGACGTTCTCTTATTCTCTGAGGCACTCAAGGTGATGGAGAGCACCACATGA 354 0.3814 MEFVKKCKKVLGSKRLHAEENESGKLTNEEKQHYEKKNMHRVAPKGCIYVYVGPNSERFLMKIKMVNHPLFKKLLGESEREYEYDSYEYGYRNDGPLWIPCDVLLFSEALKVMESTT 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02384 117 Pfam Auxin responsive protein 6 112 IPR003676 GO:0009733
Cca09g02384 117 PANTHER SMALL AUXIN-UP RNA-RELATED 1 116 - -
Cca09g02384 117 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 116 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02384 Cca-Chr9 49240044 49240490 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02384 29 113 Calmodulin-binding Proteins AT4G34750 37.931 2.08e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02384 K14488 - ccaj:109816450 236.113