Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02374 ATGACGACGAGTCCCAGGAGGATGAAGAATACAAAGAGGACGATGACAAAGAAAACGAACCCTCTCTCTATGCCTCCGCCACTCTCGCCGTTACCGTCGCTGTCCCCGCTTCCTCCGTCTCCAACGGCGCCCACGCCCCGATGTCGGCGCCCTCCGCCACCACCGTTGTGGACCGACGAAGATGAGATCGAGCTCCTGCAAGGCTTCCTCGACTACACCTCACAGCGAGGATCCTCTCAACACAACGACACCGCTCTGTTCTACGACCAAATCAAGTTGAAGCTCCAACTCGATTTCAACAAGACATTGGCTGCGGCAAAGGAGGCTCTAGCTGCGGCGAAGGAGGCGCTGCGTGGTGGCTTCAGCGTTGCTCTTGAGCAGGTCGGCGAGCGCAGTGGGGGCTTCAGGGTGGCAGCGGAGTACAGGTACGGACGGGGAATTGGAGGGCGACGGTGGCGAATATGGCGGCGCCGGCGAGCGTTTTGA 486 0.6008 MTTSPRRMKNTKRTMTKKTNPLSMPPPLSPLPSLSPLPPSPTAPTPRCRRPPPPPLWTDEDEIELLQGFLDYTSQRGSSQHNDTALFYDQIKLKLQLDFNKTLAAAKEALAAAKEALRGGFSVALEQVGERSGGFRVAAEYRYGRGIGGRRWRIWRRRRAF 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02374 161 MobiDBLite consensus disorder prediction 1 59 - -
Cca09g02374 161 MobiDBLite consensus disorder prediction 1 22 - -
Cca09g02374 161 Pfam Protein of unknown function, DUF573 56 102 IPR007592 GO:0006355
Cca09g02374 161 MobiDBLite consensus disorder prediction 23 53 - -
Cca09g02374 161 PANTHER BNAANNG10740D PROTEIN-RELATED 56 102 IPR007592 GO:0006355
Cca09g02374 161 PANTHER BNAANNG10740D PROTEIN 56 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02374 Cca-Chr9 49093511 49093996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02374 56 107 GeBP Transcription Factor Family AT3G04930 72.222 1.92e-16 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Cca09g02374 DUF573 4.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02374 - - gmx:100790030 96.2857