Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02364 ATGGCTCCCTCCGACCAATCTCGCCACTCTCTTGTCCCTGGATTCTTATACTCATCAAAAACACTGTCCCATTTGAATAACACCAATCATGGGTTGCCACCATCATCCATTGCATCACATTCATCGTCATCATTGCCACAGGGAGGGAGCAAGAGTCCTATGATCCTTTCACCCAAAGAGGGAATCCGCATGTTTTCTCCTTCTTACTATGCGGCATGCAGTGCTGGTGGCGTCTTCAGCTGTGGCCTTACCCACATGGCTGTCACTCCTCTCGATCTTGTCAAGTGCAACATGCAGATTGATCCTGTAAAGTACAAGAACATCTCATCAGGATTTGGAGTGTTACTGAAGGAGCAGGGGGCTAAAGGTTTCTTCAGGGGATGGGTGCCTACACTGCTAGGGTACAGTGCTCAAGGAGCATGCAAGTTTGGGTTTTATGAGTTCTTCAAGAAGTATTACTCAGACCTTGCAGGACCCGAGAATGCAGTGAAGTACAAAACGATCATATATTTAGCCGGTTCTGCTTCAGCAGAAGTGATTGCTGATATTGCCCTTTGCCCCATGGAGGCTGTCAAAGTTCGTGTACAAACTCAGCCTGGCTTTGCTCGAGGTTTGTCGGATGGCTTACCCAAGTTTATCAAGGCTGAGGGTGCTTCTGGGTTATATAAAGGACTCGTTCCTCTTTGGGGCCGTCAAATTCCATACACGATGATGAAATTCGCTTCCTTTGAGACTGTTGTGGAGATGATCTACAAATATGCGATCCCATCCCCTAAGGAGAAGTGCAGCAAAAATTTGCAGCTTGGAGTGAGTTTTGCAGCTGGATATGTGGCAGGTGTGCTGTGTGCAATTGTCTCACACCCTGCTGACAACCTCGTTTCTTTTCTCAACAATGCCAAGGGAGCCACTGTCGGTGATGCTGTGAAGAATATTGGGGTAGTGGGACTTTTCACTCGTGGCCTTCCTCTTCGTATAGTTATGATTGGAACACTAACTGGAGCCCAGTGGGGACTCTATGATTCATTTAAAGTATTTGTAGGGCTGCCAACTACTGGAGGAAGTGCTCCACCTCCTGCTCCTGTCAAGTAG 1089 0.4757 MAPSDQSRHSLVPGFLYSSKTLSHLNNTNHGLPPSSIASHSSSSLPQGGSKSPMILSPKEGIRMFSPSYYAACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPVKYKNISSGFGVLLKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAVKYKTIIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFIKAEGASGLYKGLVPLWGRQIPYTMMKFASFETVVEMIYKYAIPSPKEKCSKNLQLGVSFAAGYVAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKNIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPPPAPVK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02364 362 Pfam Mitochondrial carrier protein 170 253 IPR018108 -
Cca09g02364 362 Pfam Mitochondrial carrier protein 70 154 IPR018108 -
Cca09g02364 362 Gene3D Mitochondrial carrier domain 68 345 IPR023395 -
Cca09g02364 362 PANTHER PHOSPHATE CARRIER PROTEIN 1 358 - -
Cca09g02364 362 SUPERFAMILY Mitochondrial carrier 70 340 IPR023395 -
Cca09g02364 362 MobiDBLite consensus disorder prediction 28 51 - -
Cca09g02364 362 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 358 IPR044677 GO:0005315|GO:1990547
Cca09g02364 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 165 249 IPR018108 -
Cca09g02364 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 266 345 IPR018108 -
Cca09g02364 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 68 152 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02364 Cca-Chr9 49002582 49006418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02364 5 359 Chloroplast and Mitochondria Gene Families AT5G14040 75.956 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02364 K15102 - gmx:100800530 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02364 09 49002582 49006418 Cca09g02364 09 49002582 49006418 ECH