Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02362 ATGATGCACTGGCCAACAAGGAAAACCATGGCAATAACTGTGGTGTTGCTTCAGCTGAGCTTTTCCTTTGAGATCTTCTGTCTCTCTTATCATGCAGATAGAATTGTTCGGCTTCCTGGCCAACCCAACATAGGCTTCCAACAGTTCTCAGGATATGTCACAGTTGATGACATGAAACACAAGGCTCTCTTTTACTATTTTGTTGAATCAGAAACTGATCCAGCTTCAAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTGGGAGTGGGTGCATTCTCTGAAAATGGACCTTTTAGACCCAATGGGGAAGTTCTGATAAAAAATGAGTACAGTTGGAACAGAGAGACAAACATGTTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTGGCTTCTCCTATAAGAATGTGAATGATGAGACAACAGCCAGGGACAATCTTGTATTCTTGCAACACTGGTTTAACAAGTTCCCTCAATACAGACAGAGAGATTTGTTTCTAGCAGGAGAAAGTTATGCAGGGCATTATGTTCCACAACTTGCAAAGCTCATGATTGAAATAAACAAAAAGGAGAAGATATTCAATCTGAAAGGCATAGCTTTGGGTAATCCAGTTCTAGAATATGCCACAGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCACGGATTGATATCAGATTCAACGTACAAATTGTTCACTACAGGTTGTAATTATTCCCGGTATGTCAGTGAATACTATAGAGACTCAATTTCGCCACTTTGTTCAAAGGTTATGAGGCAAGTAAGCAGAGAAACCAGTAAATTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCCTCAGTGCTTTCACAATCCAAAGCTTTTTGTCCTCAAGGCCAACAAACAAATGAGAGCATAGATGTATGTGTAGATGACAAAGTTAGAAATTACTTAAACCGAAAAGATGTGCAAAAGGTTCTCCATGCCAAGCTTGTTGGAGTTCGAAAGTGGGATGTCTGCAGCAACATTCTGGACTATGATATGCTCAACCTGGAGGTACCAACACTTCCTGTTGTTGGATCACTTATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTTACTGGAAGCCGCACCTTGGTTCAAAAGCTTGCTAGACAACTAAGGCTGAATACAACAGTCCCTTATAGAGTATGGTTTGAAGGCCAGCAGGTTGGTGGATGGACTCAAGTTTATGGCAATATCCTCTCATTTGCCACCGTAAGAGGTGCCTCCCATGAAGTCCCTTTCTCACAGCCTCAAAGATCGCTTGTTTTGTTCAAGTCATTCTTGGAAGATAAGCCCCTACCTGAATTTTCTGATAAAACTTAA 1410 0.4142 MMHWPTRKTMAITVVLLQLSFSFEIFCLSYHADRIVRLPGQPNIGFQQFSGYVTVDDMKHKALFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNRETNMLYLETPVGVGFSYAKGGFSYKNVNDETTARDNLVFLQHWFNKFPQYRQRDLFLAGESYAGHYVPQLAKLMIEINKKEKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKLFTTGCNYSRYVSEYYRDSISPLCSKVMRQVSRETSKFVDKYDVTLDVCISSVLSQSKAFCPQGQQTNESIDVCVDDKVRNYLNRKDVQKVLHAKLVGVRKWDVCSNILDYDMLNLEVPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLRLNTTVPYRVWFEGQQVGGWTQVYGNILSFATVRGASHEVPFSQPQRSLVLFKSFLEDKPLPEFSDKT 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02362 469 Pfam Serine carboxypeptidase 42 458 IPR001563 GO:0004185|GO:0006508
Cca09g02362 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Cca09g02362 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Cca09g02362 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Cca09g02362 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Cca09g02362 469 Gene3D - 360 458 - -
Cca09g02362 469 Gene3D - 314 350 - -
Cca09g02362 469 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Cca09g02362 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 464 IPR001563 GO:0004185|GO:0006508
Cca09g02362 469 PANTHER CARBOXYPEPTIDASE 28 464 - -
Cca09g02362 469 SUPERFAMILY alpha/beta-Hydrolases 36 463 IPR029058 -
Cca09g02362 469 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Cca09g02362 469 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02362 Cca-Chr9 48978321 48981507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02362 322 462 Calmodulin-binding Proteins AT2G22960 26.241 1.56e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02362 K16297 - gmx:100800002 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02362 09 48978321 48981507 Cca09g02362 09 48978321 48981507 ECH