Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02361 ATGTCGCAGTGGACATTGCAGGGCAGAGGCCAAGAGAAGGAATTGGAACTCGAGAGTGGGGAGTCTGAGGCTGAGATTGAGGTCCCATTGCCTCTCACTGTGACTTCTCGGGCTTTGTATATGTTGGGAGATATCACAGGAGGGCATGCGTTTAGGTTCACGCAATGGCTCCAAATTGTTCGTAAACGCACTGCAAACTATCGTTATTCTGGCTTCCCTCACCGCACTTCCACCACCATGCTTTCTACGTCTTGCATCAAAGAACCGTTGGGGGATTCAAAATTGAACCTGCACCCTGATCAGACAGAAAGCTTGTGGGAGAGGCTTGGGAAGGCTGCAATGTTGGATGTTGAATCGAGCTCCTTTTCTTGGGACATGCTCTCTTCACTGCACCACACTGAACACAGCAGTAGCAATGAACATTCTGAGGATGAGATGAACAAAGCTCTTGAGGTAACTGTAAACTCAGGAGGAGTTGTCTTCTTTGCCTTTTTCAATTGCCTTGGGAATGCTGGTGCTTGTCCAAAAGAAGCAGCAGCTGTTATAAAGATATCATCATCAAGAATGGCAACACAGTCTGAACGCCTTGGCTATGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCACAGGGTAGAGTCATTCACAATACCTGTTCAGAATGGCAACAAATAAAGGAAGCTACAGAAAAAGCTAGAGAAGCAGCAAATTCTGAGGGTGATGAAATTGGTGAAATGACATGTTTTGAACTTTTGGAAGCACTTGAGCTTAGTCGATGTCTCTTTTTCATGAGTTATGTACACGGTTCACCCTTGCTTGAAAACACAAGTGCATTTGAGTCAAGGGAATATGCAGAAAGAACATCAGAAGCTCTTGGCAGGGTACTCATGCTGGACCTTGTCATCAGAAACGAAGATAGACTGCCTTGCCGTGAGCTTAGATGGCGTGGGAACCCAGCAAATTTGTTGTTGGCTGAAAAGACTATCTGTGCAAATACAGATTCGATAGAAGCAGCTTTTGATTCTGCAATTAACCGATATAGACCAAAGGTGATCAGGGCACTTCAGAAAGAAAGAAGGTCAACTTCAGTAGATTGCAGACTCAATTCTCATAATCCCACCTTAATATCACAATCCTCTGATCTTTCAGAGATTGCAGAATCACCAAGATCTGCTGACATGAGCCTTGCTAGTCAAACTTCAGAAGAATCAATGTCTTCTGACTTTAACATAGTAGCCATTGATTCTGGTGTTCCTCGGCGTCCCCCTGTTGGAAAACGTGCAAACGATCAGGTTAATTACCCCAAGTTGATTGAGTTGCTAATCAATAGTTCTGAATTTGCTTCAAACCTGATACATGATATAACTGGAGGAAAATTAGGATGTCCCCCACCAGAAGACGTGGATAAAACTGATGTACATGCAAGTGACACGATGCATGTAGTTCATGCATTCCGTAATGGTTTCCGTGGTGCACTTAGGGATCTTCAGGGATTTCATATATTCCTACTCACACTTCACCAAAGACTTGAGACTTTGTTACGATTGTTTATGAACATTATAAGTAAAATATCTTCGGGAGAATCTGATAAAGAAGATTCTTTGGTTCCTGACTCACCTTCACTGGCTGCTGGCGGGAGTTGTTCCTCTCCAACATGTAAGGAAAGGCTTGCTAATGATAACCATCATGATTTTATTGACTCAGAATCACATAGAGCTGCTTTAAGGGGATCATCTTCCGGCAATAGAGATTGCAGTGACTCTACTCCTATGTCAAGAGAAAGTTGGCATGGAAAGTTCTATAAAGGATATGGGGAACCACTTCGTAGTCTCCGCTTGACTGCTAAGCTCCGAGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCCAATAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAGTGATGCTATTAAACTATGCCAGGAGAACAATTTCAATCCAGGATTTTTTGAGGGTAGTGATAATAACAGTGTTGTTGATGCATATGAACTTAAGGTCAGACTTGAGCATATTCTCGAGAGAATTGCATTGATATCAGACGCAGCAAGTACTGAGAAACCTTCAGCAGTGACAAGTAGTCTGTTCATTGGTGGAGCACTGGCTGCAAGATCTGTATACACATTGCAATACTTGGGAATCACAAACATTTTGTGTTTGTGTACCAATGAAATTGGACAGTCAGAAACTCAGTATCATGATCTATTTGAGTACAAGAATTTCTCTGTATGTGACAGTGATGATTATAACATCAGCAGCATATTTGACGAAGCATGTGATTTTATAGATGATGTTGAACAAACGGGTCAAAAAGTTTTAGTTCATTGCTTTGAGGGCAGAAGCAGAAGTGTCACGTTGGTTCTCGCTTACTTAATGCTCAGGAAGAAGTATACTTTGTTAGAAGCATGGCAAGCTCTGAAACGAGTACACCGTCGAGCACAACCTAACGACGGTTTTGCAAAGATCTTGCTGGAACTTGATCTGAAACTACATGGAAAGGTTTCGATGGAATGGTATCAACGGAAACCGATGATGAAAGTCTGCCCCATCTGTGGGAAGAATGCTGGACTAAGCAGCAGCTCACTCAAGCTACATCTGCAGAAGTCTCACAGAAAGCTATCATCTGGGAGTGTAGATAGTGCCATGACTATGGAAATCCAGAAAGCATTAACAGCATTGAAGATTAGCCGTGGTGGAAGTGTCAGTCCCACACAAAGGTCATCACATCCAATAATAAGCCCATCTCATCCAATGATAAGCCCATCTCATCCAATGATAAGCCCCACACAAGGGTCGTCTCATCCAATAATAGATCAATAG 2841 0.4263 MSQWTLQGRGQEKELELESGESEAEIEVPLPLTVTSRALYMLGDITGGHAFRFTQWLQIVRKRTANYRYSGFPHRTSTTMLSTSCIKEPLGDSKLNLHPDQTESLWERLGKAAMLDVESSSFSWDMLSSLHHTEHSSSNEHSEDEMNKALEVTVNSGGVVFFAFFNCLGNAGACPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQGRVIHNTCSEWQQIKEATEKAREAANSEGDEIGEMTCFELLEALELSRCLFFMSYVHGSPLLENTSAFESREYAERTSEALGRVLMLDLVIRNEDRLPCRELRWRGNPANLLLAEKTICANTDSIEAAFDSAINRYRPKVIRALQKERRSTSVDCRLNSHNPTLISQSSDLSEIAESPRSADMSLASQTSEESMSSDFNIVAIDSGVPRRPPVGKRANDQVNYPKLIELLINSSEFASNLIHDITGGKLGCPPPEDVDKTDVHASDTMHVVHAFRNGFRGALRDLQGFHIFLLTLHQRLETLLRLFMNIISKISSGESDKEDSLVPDSPSLAAGGSCSSPTCKERLANDNHHDFIDSESHRAALRGSSSGNRDCSDSTPMSRESWHGKFYKGYGEPLRSLRLTAKLRDFHKFAKVDAESNKELEQWNEMLKSDAIKLCQENNFNPGFFEGSDNNSVVDAYELKVRLEHILERIALISDAASTEKPSAVTSSLFIGGALAARSVYTLQYLGITNILCLCTNEIGQSETQYHDLFEYKNFSVCDSDDYNISSIFDEACDFIDDVEQTGQKVLVHCFEGRSRSVTLVLAYLMLRKKYTLLEAWQALKRVHRRAQPNDGFAKILLELDLKLHGKVSMEWYQRKPMMKVCPICGKNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRSSHPIISPSHPMISPSHPMISPTQGSSHPIIDQ 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02361 946 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 7 920 IPR035010 GO:0004721|GO:0009737|GO:0043622
Cca09g02361 946 MobiDBLite consensus disorder prediction 527 546 - -
Cca09g02361 946 MobiDBLite consensus disorder prediction 374 402 - -
Cca09g02361 946 ProSiteProfiles Dual specificity protein phosphatase domain profile. 694 839 IPR020422 GO:0006470|GO:0008138
Cca09g02361 946 Gene3D Protein tyrosine phosphatase superfamily 677 847 IPR029021 -
Cca09g02361 946 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 759 815 IPR000387 GO:0016311|GO:0016791
Cca09g02361 946 MobiDBLite consensus disorder prediction 570 592 - -
Cca09g02361 946 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 7 920 - -
Cca09g02361 946 CDD DSP 695 832 - -
Cca09g02361 946 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 694 839 IPR029021 -
Cca09g02361 946 MobiDBLite consensus disorder prediction 904 946 - -
Cca09g02361 946 MobiDBLite consensus disorder prediction 572 592 - -
Cca09g02361 946 Pfam Dual specificity phosphatase, catalytic domain 715 833 IPR000340 GO:0008138|GO:0016311
Cca09g02361 946 Gene3D - 270 386 IPR036940 GO:0016301
Cca09g02361 946 SUPERFAMILY Protein kinase-like (PK-like) 55 430 IPR011009 -
Cca09g02361 946 MobiDBLite consensus disorder prediction 1 22 - -
Cca09g02361 946 SMART dsp_5 694 836 IPR020422 GO:0006470|GO:0008138
Cca09g02361 946 Pfam Actin-fragmin kinase, catalytic 103 417 IPR015275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02361 Cca-Chr9 48965828 48973677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02361 7 917 Protein tyrosine phosphatase (PTP) family AT5G23720 64.208 0.0 1124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02361 K14165 - gmx:100791993 1564.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02361 09 48965828 48973677 Cca09g02361 09 48965828 48973677 ECH