Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02330 atgaaattgagagagaaaGAGAATGAAAGATCGTCAATGGGGTGGGTGCTTCCGCAGAGGACGCAGAACATAAGAGAGGCGTACGAGGTGGGAAGGAAGCTGGGGCAGGGGCAGTTCGGGACGACGTTCCTGTGCACGTGCCGCACGAGCGGGAGGAAGATGGCGTGCAAGTCCATCCCGAAGCGGAAGCTGGCGTGCAAGGAGGACTACGAGGACGTGTGGAGGGAGATTCAGATAATGCACCACTTGTCGGAGCACAACCACGTCGTCCGCATCGAGGGTGCGTACGAGGATTCCTCTGCTGTGCATCTGGTCATGGAGCTCTGCGAGGGTGGAGAGCTTTTTGATAGGATTGTGCAAAAGGGTCATTACAGCGAGCGACAGGCTGCTCGCTTGATTAAGACCATTCTTGAGGTTGTCGAGTGCTGCCACTCGCTTGGAGTCATGCATAGGGACCTCAAGCCTGAGAATTTTCTCTTTGATACTGTTCATGAGGATGCTAAGCTTAAGGCTACTGATTTTGGTTTGTCTGTTTTTTACAAGCCAGGTGAATCCTTTTGTGACGTTGTTGGGAGTCCATACTATGTCGCACCAGAGGTCTTGCGCAAGAACTATGGACCAGAATCAGATGTGTGGAGTGCAGGGGTTATTCTGTACATCTTATTAAGTGGGGTGCCACCATTTTGGGCCGAAACCGAACAAGGGATCTTCAGACAGATTTTACAAGGAAAACTTGATTTTCAATCTGAGCCTTGGCCTAGCATTTCAGACAGCGCAAAGGATCTAATTCGGAAAATGCTTGATCAAAATCCAAAAACTAGGCTTACAGCATATGAAGTACTCCGCCACCCATGGATCGTTGATGACAATATTGCACCTGATAAACCTCTTGATTCTGCAGTTTTATCACGTCTGAAACAATTCTCTGCAATGAATAAATTGAAAAAGATGGCATTGCGTGTTTTGCTTGCTTAA 975 0.4769 MKLREKENERSSMGWVLPQRTQNIREAYEVGRKLGQGQFGTTFLCTCRTSGRKMACKSIPKRKLACKEDYEDVWREIQIMHHLSEHNHVVRIEGAYEDSSAVHLVMELCEGGELFDRIVQKGHYSERQAARLIKTILEVVECCHSLGVMHRDLKPENFLFDTVHEDAKLKATDFGLSVFYKPGESFCDVVGSPYYVAPEVLRKNYGPESDVWSAGVILYILLSGVPPFWAETEQGIFRQILQGKLDFQSEPWPSISDSAKDLIRKMLDQNPKTRLTAYEVLRHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVLLA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02330 324 PANTHER BNAA09G05220D PROTEIN 12 322 - -
Cca09g02330 324 SUPERFAMILY Protein kinase-like (PK-like) 12 308 IPR011009 -
Cca09g02330 324 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02330 324 Gene3D Transferase(Phosphotransferase) domain 1 115 324 - -
Cca09g02330 324 ProSitePatterns Protein kinases ATP-binding region signature. 34 67 IPR017441 GO:0005524
Cca09g02330 324 CDD STKc_CAMK 28 285 - -
Cca09g02330 324 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02330 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Cca09g02330 324 Pfam Protein kinase domain 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02330 324 PANTHER SERINE/THREONINE-PROTEIN KINASE 12 322 - -
Cca09g02330 324 Gene3D Phosphorylase Kinase; domain 1 30 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02330 Cca-Chr9 48626204 48632075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02330 3 322 EF-hand Containing Proteins AT1G35670 75.000 0.0 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca09g02330 Pkinase 9.2e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02330 K13412 - gmx:100806678 592.808