Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02329 ATGGGTCATTGGGGTGTTTGTCATCAAGTCATGTTCATTGGTCAGCAAGAGGAATGTGAACTCACTTCCACCATTCCTAAGGTTGAGGAATCAGAAGATGAAGAAAAAGTCATTGACGTTGAGCCTATCTTCATGCCAAAATTTAAGAAAAGAAAACGCCTAAGCCTTAATCGTCTTAGAGAGATTAAAGCAGATATGTGCGATGGGCAAAGTAGTGACATGGCTAAAACAAAGAAGTGTGCAAGCAGAGACAGATGGTCAGCTAAGAGGTATAAGTTGGCTGAGCAAAGCATGTGGGAGGTCTTAAAAGGTGAAGGTGCAACTTTTGAAAATCCAATTACCCGAAATGCACTAAGATTGGCTGCCCGTAAGCACATTGGTGATACTGGACTATTAGACCACTTACTAAAGCACATTGATGGTAAAGTGGCACCTGGAGGAACTGAGCGGTTCCGACGGTGGTTCAACACCAATGGAATCATGGAGTATTGGTTGGAGAGTGCTAGTTTGGATAAGATCCGCCAGGAGGCCGGGATGCAAGACCCTTACTGGATACCACCGTCTTCTTTAAGGGCATGCAGTGTTCCTACTCTGAATACTGATTCCATTGGTGAACTGAAAATGCTTAAAATAGAAATGGCCCAGATGAAAAAAGATATGCAAGAGCTCATTGCCAAGAAGCAAGAAAAAAACGAAATGTGTTTGATGAAGGAGACACAGAAAAATTATGTGAATTGGAAAGCTATGACTGAGCAGCGTGTAACTGATATTATAAATTCTTTGAAGGGTGTGCAGGGCATGCATGAAGACATGTTGATTTGGAAAACTAAAGTTGAGCAACAGCTTATGCAAATAACCAACAAATTGAGTGGTGTGCAGACATTGAGAGAACACACCACTTCAAGTTATTCTCCTGTAAGATGGGAGGATTGGCTGGAAAGCACCAACCTAGACAATATTCAGGGAAATGAACTTGGACCTTGGTTTGGGAATCCTGAGCTACTTAATGTTCTTCCACAAGAGGTTGTACTTCAAGATCCAAACTTAACCCTACCAACTCAGCTGCACGGGGTAGAACTGACTAACATGAGGAGCAATTTGCTGGAGTTGGTGCCAGAGAAGCTAAAGGAAGATCAAACTAATGTGACACCTGATTCTTCTACGACGGTTAACTCAAAATCAGAAACTGACAATTCATTGATATTGTTTCAGGAAATGTTCATGGAGTTATTTACATCAAGGGATAAAATGGAGCAGCAGTTATTGGATATATCAAATACTGTATATCAGTGTAGGGCTTAG 1302 0.4147 MGHWGVCHQVMFIGQQEECELTSTIPKVEESEDEEKVIDVEPIFMPKFKKRKRLSLNRLREIKADMCDGQSSDMAKTKKCASRDRWSAKRYKLAEQSMWEVLKGEGATFENPITRNALRLAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTNGIMEYWLESASLDKIRQEAGMQDPYWIPPSSLRACSVPTLNTDSIGELKMLKIEMAQMKKDMQELIAKKQEKNEMCLMKETQKNYVNWKAMTEQRVTDIINSLKGVQGMHEDMLIWKTKVEQQLMQITNKLSGVQTLREHTTSSYSPVRWEDWLESTNLDNIQGNELGPWFGNPELLNVLPQEVVLQDPNLTLPTQLHGVELTNMRSNLLELVPEKLKEDQTNVTPDSSTTVNSKSETDNSLILFQEMFMELFTSRDKMEQQLLDISNTVYQCRA 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02329 433 PANTHER DYAD PROTEIN 3 430 - -
Cca09g02329 433 Coils Coil 206 233 - -
Cca09g02329 433 PANTHER PROTEIN DYAD 3 430 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02329 Cca-Chr9 48619462 48623052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02329 85 169 PHD Transcription Factor Family AT5G22260 40.698 1.30e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02329 - - gmx:100792586 620.928