Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02326 ATGGCACCGATAGAAAAAATTAATGCACGTCAGCACTTGATGTCCAGCAAGCTTATCGTGGCAGCTTGCATGCCTTGTGGACGCACACGTGCAGTTGTGCATGCGAAAGCGGTGCTCCACCTCCAAGGCAAGAAGTTGATCATGATCATGGTGATGGAGAGGAAAACATTTGGGCTTTTGTTCTTGGTCCTCCTCGTCTTAGCTGCTGATGTGGCAGTGGAGAGAGGAGAGGCTGCAGTGTGCTTCGCAAGAAGGCATGGATTCCAGGGACGATGCTTAGTCGACGCGCAGTGTGCACACGTGTGCAGGTCCGATGGTTTCATTGGTGGCGAGTGCCGAGGACCCTTTCGCAATTTCCGTGATTATATGGCTTCTGATGGAAAGGAAAATAATATTAATATAGGGTTTTTGTTCTTGTTGGTCCTCATCTTATCTGCTGACGTGGCAGTGGAGACAGCAGAGGGGAGAAATTGCTTGTCAAAAAACCACAAGTTCAAGGGTGTATGCTTAAGTGATACCAACTGCGGACGACATATATGCAGAACCCAAGGTTTCAGCAGTGGCAAGTGCAGAGGCTTTTGCACCAAGATTTGTTGA 597 0.4858 MAPIEKINARQHLMSSKLIVAACMPCGRTRAVVHAKAVLHLQGKKLIMIMVMERKTFGLLFLVLLVLAADVAVERGEAAVCFARRHGFQGRCLVDAQCAHVCRSDGFIGGECRGPFRNFRDYMASDGKENNINIGFLFLLVLILSADVAVETAEGRNCLSKNHKFKGVCLSDTNCGRHICRTQGFSSGKCRGFCTKIC 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02326 198 Pfam Gamma-thionin family 157 198 - -
Cca09g02326 198 Pfam Gamma-thionin family 80 117 - -
Cca09g02326 198 SUPERFAMILY Scorpion toxin-like 156 198 IPR036574 -
Cca09g02326 198 Gene3D - 80 120 IPR036574 -
Cca09g02326 198 Gene3D - 156 198 IPR036574 -
Cca09g02326 198 PANTHER DEFENSIN MTDEF4.7 134 195 - -
Cca09g02326 198 PANTHER DEFENSIN MTDEF4.7 52 115 - -
Cca09g02326 198 SUPERFAMILY Scorpion toxin-like 80 117 IPR036574 -
Cca09g02326 198 PANTHER DEFENSIN-LIKE PROTEIN 1 134 195 - -
Cca09g02326 198 PANTHER DEFENSIN-LIKE PROTEIN 1 52 115 - -
Cca09g02326 198 SMART gth_4 80 115 IPR003614 GO:0006952
Cca09g02326 198 SMART gth_4 157 198 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02326 Cca-Chr9 48584316 48585872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02326 129 198 Plant Defensins Gene Families AT5G63660 44.000 2.28e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02326 - - ccaj:109813694 134.42