Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02319 ATGCAAGAGACGCTCCTCACTCTCCCTCTCTCTCCGCGCGACGACATCCGCATTCCCGTTCCCGCCAAGAAGAAGAAagcgcagcagcagcagaataacagcagcagTGGTCATTCGAGTCGCGTGTCGCGGCGCGTGAGTCCGGCTTCCGGCGAGAAGTCTCTCCCGAACGGCGACATCTACAGCGGCGCGGTGTCGGGGAACGCGCCGCACGGCACCGGCAAGTACCTCTGGTCCGATGGGTGCATGTACGAGGGGGAGTGGCGCAAGGGCAAGGCCTGCGGCAGGGGCCGCTTCTCGTGGCCCTCCGGCGCCACCTACGAGGGCGAGTTCAAGTCCGGTCGCATAGACGGCTTCGGCTCCTTCATCGGCGTGGACGGCGACATGTACCGCGGCTCATGGCTCGCCGACCGGAAGCACGGCTTCGGCGAGAAGCGCTACGCCAACGGCGACGTCTACGAGGGTTGGTGGAAGTGCAACCTGCAGGACGGAGAAGGCAGGTACGCGTGGCGCAACGGGAACGAGTACGTTGGTGAGTGGAAGGGTGGCGTCATTTCCGGCAAGGGCGTCTTGGTGTGGGCTAACGGAAACCGCTACGAGGGGTATTGGGAGAACGGCGTGCCCGTGGGGAAGGGTGTTTTCACGTGGTGCGATGGTAGCACTTGCGCTGGGAATTGGGGGAAGGAGTTTATGGAGGAGGCACGTGATGAGGAGAAGATGAAGCGGTGTTCGGTGGATGGCTGTCGGAGTGTGACTTTTCCCAGGATTTGTATTTGGGAGCTCGATGGAGAAGCTGGTGACATCACGTGTGACATTGTTCACAATGCTGAGGCTTCTATGTTTTACAGGGATGCTAGTGGTACTAGTGAGTCCGAGTATGGTGGAGATGataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataataatGGGGTTTTGCAGAAGAGCCCTTGTTGGTCTCTTGATGAGGTTAAGAAGCCTGGCCAAACTGTGTCTAGAGGGCATAAGAATTATGATCTCATTCTTAATCTTCAACTGGGTATTAGATACACTGTTGCCAAGCATGCTTCTATTGTGAGAGAGCTTAGGCCAGGGGATTTTGATCCCAAGGAGAAATTCTGGACGAGGTTTCCACCGGAAGGGTCTAGGTTTACGCCGCAGCATAATTCTGTGGACTTCAGGTGGAAAGACTACTGTCCCATGGTGTTCAGACATCTAAGGGAATTATTTGCCATAGATCCTACGGATTACACGCTTGCTATTTGCGGAAGTGACACACTTAGGGAGATGTCTTCACCGGGCAAAAGTGGAAGCATCTTTTATCTCACTCAAGATGACCGCTTCATAATTAAGACTGTCAAGAAGTCTGAAGTCAAGGTGCTCATCCGGATGCTTCTAAGTTACTACCAACATGTTTGTCAGTACAAGAACTCCTTGGTGACAGCATTCTTGGGCGTGCATTGTGTCAAACCTGTTGGAGGTCAGAAGACCCGGTTTATTGTAATGGGCAATGTGTTTTGCTCCGAGTACCGGATTCACAAAAGGTTTGATCTCAAAGGTTCTTCTCATGGTCGAACAACGGATAAGCCGAGGGAGGAGATTGATGAGACTACCACTCTCAAAGACCTTGATCTTAATTTTGTCTTTCGCCTGGAGCAGTCTTGGTTTCAAGAGCTTAAATGGCAACTTGATAGAGACTGTGAGTTCTTGGAAGCAGAGGGAATCATGGATTACAGTCTTCTAATTGGCCTGCATTTTCGTGATGATTGCTCAGTTGATGAAATGAAAGGTTCACCACGGGATTCCAATTCAGGCAAGAGAGACATGCACGATGATGATGAGATGCTCACATGCCGGGGACCTCTAATCCGTCTCGGAATGAACATGCCTGCCAGAGCTGAGAGAGTGTGTAAGACTGGAGTGGATCAGCAAACGGGTGGTGGAAGTAGCAATTCTACCCCATCAGAGAGTAATAGCCAGATCTCTGATGTCATCCTCTACTTTGGTATCATTGACATTCTCCAAGACTATGATATTAGCAAAAAGATAGAACATGCATACAAGTCATTACAAGTGGACTCCACCTCTATCTCAGCTGTTGATCCCAAGCTATACTCCAAAAGGTTTAGGGATTTCATACACAGAATCTTTGTAGAGGATAAATGA 2253 0.4758 MQETLLTLPLSPRDDIRIPVPAKKKKAQQQQNNSSSGHSSRVSRRVSPASGEKSLPNGDIYSGAVSGNAPHGTGKYLWSDGCMYEGEWRKGKACGRGRFSWPSGATYEGEFKSGRIDGFGSFIGVDGDMYRGSWLADRKHGFGEKRYANGDVYEGWWKCNLQDGEGRYAWRNGNEYVGEWKGGVISGKGVLVWANGNRYEGYWENGVPVGKGVFTWCDGSTCAGNWGKEFMEEARDEEKMKRCSVDGCRSVTFPRICIWELDGEAGDITCDIVHNAEASMFYRDASGTSESEYGGDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGVLQKSPCWSLDEVKKPGQTVSRGHKNYDLILNLQLGIRYTVAKHASIVRELRPGDFDPKEKFWTRFPPEGSRFTPQHNSVDFRWKDYCPMVFRHLRELFAIDPTDYTLAICGSDTLREMSSPGKSGSIFYLTQDDRFIIKTVKKSEVKVLIRMLLSYYQHVCQYKNSLVTAFLGVHCVKPVGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTTDKPREEIDETTTLKDLDLNFVFRLEQSWFQELKWQLDRDCEFLEAEGIMDYSLLIGLHFRDDCSVDEMKGSPRDSNSGKRDMHDDDEMLTCRGPLIRLGMNMPARAERVCKTGVDQQTGGGSSNSTPSESNSQISDVILYFGIIDILQDYDISKKIEHAYKSLQVDSTSISAVDPKLYSKRFRDFIHRIFVEDK 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02319 750 MobiDBLite consensus disorder prediction 668 687 - -
Cca09g02319 750 Gene3D - 48 89 - -
Cca09g02319 750 Gene3D - 178 248 - -
Cca09g02319 750 Gene3D - 90 138 - -
Cca09g02319 750 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 36 291 IPR023610 -
Cca09g02319 750 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 336 750 IPR023610 -
Cca09g02319 750 MobiDBLite consensus disorder prediction 671 687 - -
Cca09g02319 750 CDD PIPKc_AtPIP5K_like 366 745 - -
Cca09g02319 750 SUPERFAMILY SAICAR synthase-like 363 746 - -
Cca09g02319 750 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 361 746 IPR002498 GO:0016307|GO:0046488
Cca09g02319 750 MobiDBLite consensus disorder prediction 25 47 - -
Cca09g02319 750 PIRSF PIP5K_plant 11 240 IPR017163 GO:0005524|GO:0016308
Cca09g02319 750 PIRSF PIP5K_plant 228 750 IPR017163 GO:0005524|GO:0016308
Cca09g02319 750 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 451 745 IPR002498 GO:0016307|GO:0046488
Cca09g02319 750 SMART PIPK_2 392 747 IPR002498 GO:0016307|GO:0046488
Cca09g02319 750 Pfam MORN repeat 61 83 IPR003409 -
Cca09g02319 750 Pfam MORN repeat 107 129 IPR003409 -
Cca09g02319 750 Pfam MORN repeat 84 105 IPR003409 -
Cca09g02319 750 Pfam MORN repeat 199 221 IPR003409 -
Cca09g02319 750 Pfam MORN repeat 130 152 IPR003409 -
Cca09g02319 750 Pfam MORN repeat 176 198 IPR003409 -
Cca09g02319 750 Pfam MORN repeat 153 174 IPR003409 -
Cca09g02319 750 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 56 183 - -
Cca09g02319 750 Gene3D - 534 746 - -
Cca09g02319 750 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 36 291 - -
Cca09g02319 750 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 336 750 - -
Cca09g02319 750 MobiDBLite consensus disorder prediction 287 344 - -
Cca09g02319 750 SMART morn 151 172 IPR003409 -
Cca09g02319 750 SMART morn 128 149 IPR003409 -
Cca09g02319 750 SMART morn 197 218 IPR003409 -
Cca09g02319 750 SMART morn 174 195 IPR003409 -
Cca09g02319 750 SMART morn 59 80 IPR003409 -
Cca09g02319 750 SMART morn 82 103 IPR003409 -
Cca09g02319 750 SMART morn 105 126 IPR003409 -
Cca09g02319 750 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 352 533 IPR027484 -
Cca09g02319 750 MobiDBLite consensus disorder prediction 623 642 - -
Cca09g02319 750 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02319 Cca-Chr9 48495787 48499689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02319 38 749 Acyl Lipid Metabolism Gene Families AT1G21980 60.164 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02319 K00889 - gmx:100789188 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02319 09 48495787 48499689 Cca03g00236 03 3470127 3475133 PCT