Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02299 ATGTCTCTCCCTATAAAAACCACATTGCAATTGTGCACTTTTGTTGTGCTAGTGCATTCTTCTACTCACTTCTCAGCTATGTCCGTGGTTCCTTGCAATTGTAGCCACACCACTGAAAAACATACCTCTGAGGGTGAAGGTGAAAGCTTTCACAAGTTTTTTGAGTGCTGGATTTTTGAGCAAAACCAACATCTGAAGGAACTTTTAACTGCTGAATCAACTCAGCTAACAGATGAGCAACTTGAGGCAGTGAATGATAGGGTGATGGAGCATTATGAGTGCTACTACAAGGCCAAGTCAAGGAGTGCAAAGCAAGATGTGTTGAGCATGTTGTCCCCAACATGGACAAGTTCCTTGGAGGAGGCTTTTCTTTGGATTGGTGGATGGAGACCAAGCATGGCCTTTCACCTACTATATTCCAAGTCTGGTTTGCAATTTGAGGCCAGGCTTGGTGAACTGATCCAGGGTCTAAGAACACATGATTTGGGAGACTTATCAGCATCACAACTTGCTCAGTTTGATGAGATGCAAAGGAGGACCATCTTGGAGGAGAGGGAGATCAGTGATTTGATGGCAAGGCACCAGGAGTCAGTGGCTGATGCCTCAATGGTGGAGTTGTCTCATGTGGTTTCTGAGATGATCAGAGCCAATGAAACAGGAGAGGTTGATGAGAAGAAGGAAATTGAGGACAGGGTTGAGTCAGCTTTGGTGCCAAAGGAGGAAGGTTTGGAGATGATCCTGCAGAAAGCTGACGAGCTGAGGTTGAGAACACTGAAGGCAATTGTTTGTGTTTTGGCTCCAAAACAGGCCATTCACTTCTTGATTGCTGCTGCAGAGTTGCACCTGAGGCTACATGAGTGGGGCAAGAAGATGGATGCCAGAAAGGGTAATCTTGGTTTTGGTGAGACTAAAACCCATGGTTCATCAAGTTGA 933 0.4555 MSLPIKTTLQLCTFVVLVHSSTHFSAMSVVPCNCSHTTEKHTSEGEGESFHKFFECWIFEQNQHLKELLTAESTQLTDEQLEAVNDRVMEHYECYYKAKSRSAKQDVLSMLSPTWTSSLEEAFLWIGGWRPSMAFHLLYSKSGLQFEARLGELIQGLRTHDLGDLSASQLAQFDEMQRRTILEEREISDLMARHQESVADASMVELSHVVSEMIRANETGEVDEKKEIEDRVESALVPKEEGLEMILQKADELRLRTLKAIVCVLAPKQAIHFLIAAAELHLRLHEWGKKMDARKGNLGFGETKTHGSSS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02299 310 PANTHER OS01G0159000 PROTEIN 43 297 - -
Cca09g02299 310 PANTHER - 43 297 - -
Cca09g02299 310 ProSiteProfiles DOG1 domain profile. 47 294 IPR025422 GO:0006351|GO:0043565
Cca09g02299 310 Pfam Seed dormancy control 64 140 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02299 Cca-Chr9 48212273 48213483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02299 34 285 bZIP Transcription Factor Family AT5G06960 27.273 1.69e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02299 - - gmx:100784399 469.159