Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02258 ATGAAAGGAAAATGGGGTGCACGTGGCAGGGTGGATCCGTGGGTGATGATACAGATGGCACTCCAAGACGACGTTGTACAAATAGAGAAATATGGAATCCCCTGGCTGCTGGCTGCTGCAAACGTGTTTCCTATGGTTTCTGAAAGCGGAAATGAGAACGTACTTACGTGTTGCTACAATCGCTGGACCGACACCGCCATGGGCTTGGGCCACGTCCATATAAAACGTGTACGCATGTCATGGTGCCTATCGCTGTTGATAGGGATGGAAGATTTTGTTGGACCCCGAATCAGGCCCAGAATGCACGTTCCTTGCTTGACTATAGGTTTTTGGATTTTGGTGTTGGATGGCATGAAGCGGAAGGGTGGGCGGCGAACATGGTGCTGCTCCTTGGCAATCCCTCCGTTGAGCCCCGAAGTCAGACATTCCAAACCCAAACCCACCGTTTCGCTCCCAAACTCTCCCCACACTGTCAAATCCGCTTTCCCCATCGTCGCCCGGATCTTGTCGCCGGGGAGAGTCTCTCCCATTGACAACGATCCCGCCCCCGCCGCCTCCAACCTCCGATCCAACACCTTCCGCGCTCCCTCCCCGCCGGAGCCGCTGGAGGTCAGGCTGAACGTTGACGCGGAGGTTCTGGGGGCGAACTCGGAGGTGTTTGCGGGTTTGATAGCTGATTGCAAGCGAGGTGGTGGTGGAGCCACCATGGAGGTGGAGAACTTGGGTGTCTTCACTGACACTATTCAGCTTATGTTTGAAGATGAGGATCGCATCACCAAGAGCCTCCTCAACTATGGCGTTTATCGCTCCATTCACATTTTGGAGGTTTCAGCTGGAATTATGTTCACTAAGGGCGTTCATTGCTGTTTGAAGTACCTTGAGGCGGTTCCTTGGACTGAGGAGGAAGAAGAGAAATTGAGGAGCTTGTTCTCAAGATTTGAGTTCGATGATGCAACAACAAGAGACATCTTAGGAAGACTATACTTGCATGACTCGGTAAATTCCCAGCCAAACGTGGCCCAACAACTTGTTTGGTCTATCAGCACTTGTGAGGATGCAAATGCCAGAAATGAAATGAAGTCACTAGTCAGGGGTCTTCTTTGTAAAAGCTCTGTGTATGAGAAGAACCATCGTGATCTTAGCAAGAAGGATCTATATGCTGTATGCAACTCGTGCCTAGGTTCACTTATCAGTCTCTTTGAGGAGGCATCTGGCACCACTCCTCCTGAAAGGTTGATGAAGAAAGATGTGAGCAAGCCTCTAATTGAGCGAATATCAAAACAAGTTGATAACATCAACTGGTTGCTGGAGATTATGCTTGATGGGCAAGTGGCAGAGGACTTTGTGGACATTTGGACACATCAGCAACAACTTCTTAAAATGCATGACATTGCGTCCCCTATGATCAGATATGAACTCAGTAGAGTGTCAGCAATCCTATTTGTTGCTATGGGAACAAGAAAACTCCAATGCCCTTTGGAAGCTAGATCAGGGCTTCTCCAAGTATGGTTTGGACCTATGCTATTGGACTTTGGTTGGCTTCAGAGATGCAGAAAAGGGCTTGATATGAAGGCCTTGGAAGAGGCTATGGGGCAGACACTTCTTACTCTACCTTTGAAGCAGCAGTATGTGCTATTTATGGAATGGTTTCGGCATTTCTCAAGACATGGCACTGAATGCCCAAATATGAGCAAGGCATTCCAAATTTGGTGGCGCCGATCATTTTTAAGAGGCTCTGAGACTTATGCCGTTGAATCAAGATGA 1764 0.4875 MKGKWGARGRVDPWVMIQMALQDDVVQIEKYGIPWLLAAANVFPMVSESGNENVLTCCYNRWTDTAMGLGHVHIKRVRMSWCLSLLIGMEDFVGPRIRPRMHVPCLTIGFWILVLDGMKRKGGRRTWCCSLAIPPLSPEVRHSKPKPTVSLPNSPHTVKSAFPIVARILSPGRVSPIDNDPAPAASNLRSNTFRAPSPPEPLEVRLNVDAEVLGANSEVFAGLIADCKRGGGGATMEVENLGVFTDTIQLMFEDEDRITKSLLNYGVYRSIHILEVSAGIMFTKGVHCCLKYLEAVPWTEEEEEKLRSLFSRFEFDDATTRDILGRLYLHDSVNSQPNVAQQLVWSISTCEDANARNEMKSLVRGLLCKSSVYEKNHRDLSKKDLYAVCNSCLGSLISLFEEASGTTPPERLMKKDVSKPLIERISKQVDNINWLLEIMLDGQVAEDFVDIWTHQQQLLKMHDIASPMIRYELSRVSAILFVAMGTRKLQCPLEARSGLLQVWFGPMLLDFGWLQRCRKGLDMKALEEAMGQTLLTLPLKQQYVLFMEWFRHFSRHGTECPNMSKAFQIWWRRSFLRGSETYAVESR 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02258 587 PANTHER OS04G0278000 PROTEIN 119 587 - -
Cca09g02258 587 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 119 587 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02258 Cca-Chr9 47808627 47812486 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02258 - - gmx:100786004 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02258 09 47808627 47812486 Cca09g02258 09 47808627 47812486 ECH
Cca09g02258 09 47808627 47812486 Cca03g00165 03 2557156 2559408 PCT