Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02237 ATGGAGTTCCTGGACGAGGACGCGAGGCCGAGGTTCGTGTTTCAGTCCGGTGCAGCTGCGACCACCGAGCCACCAGACCCGACCCACAAACCCACGAAGCCGTTCctcttcgctacactttctctctcctcgattttgctcactctctctctcttctTCCTCCAATCGGAGCCCTTCCAATCGCTCCTCTTCTGGTTCGCGCTCTCTCTCTTAATTGGCCCCTTCGCGCCTCCCTCCATCACCGGAGGCCACGTCCGCGTCGGCCGCGGCGATGTCGTCAACTTCCCCGATCCGGAGCCGGAGCCCGACGACGACAAGAAGCCTCCGCAGCGGCGATCCAAGCAGCGGAGACCGGAGGAAGCCCCCGCAGTAGGCCCGGTGATGGTGGCGGCGGAGAAGAGAGGAGTGGAGAAGAAGGCGGCCGCGGCGGCGACGGTAGTggaggagaaggagtggagcgaggaggacgtggaggTGCTGAAGAAGCAGATGGTTAAGAATCCGGTGGGGAAGCCGGGGCGGTGGGAGGCGATAGCGGCGGCGTTCGGGGGGAGGCACGGCGTGGAGAGTGTGATAAAGAAGTCGAAGGAGTTGGGGGAGAAGAAGGTGGATGATTCGGAGTCGTATGCGCTGTTTTTGAAGAAGAGGAAGGCGTTGGATAAAAGGGTTGTGGAGGAGAATGGAGGCGAGGATTCGGTGGAGAAGGTTGTTGAGAATGGGTGGAGTTCTGCGGAGGATATCGCGTTGCTGAATGCGTTGAAAGCGTTTCCGAAGGAAGCTCCCATGCGGTGGGAGAAGGTGGCTGCGGCGGTTCCCGGCAGATCCAAGGCGGCTTGCATGAGAAGATTCGCTGAATTGAAGAAAGGGTTTCGGAGTGCTAAAGCTGCGGCAGAGTGA 897 0.5496 MEFLDEDARPRFVFQSGAAATTEPPDPTHKPTKPFLFATLSLSSILLTLSLFFLQSEPFQSLLFWFALSLLIGPFAPPSITGGHVRVGRGDVVNFPDPEPEPDDDKKPPQRRSKQRRPEEAPAVGPVMVAAEKRGVEKKAAAAATVVEEKEWSEEDVEVLKKQMVKNPVGKPGRWEAIAAAFGGRHGVESVIKKSKELGEKKVDDSESYALFLKKRKALDKRVVEENGGEDSVEKVVENGWSSAEDIALLNALKAFPKEAPMRWEKVAAAVPGRSKAACMRRFAELKKGFRSAKAAAE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02237 298 Pfam Myb-like DNA-binding domain 240 286 IPR001005 -
Cca09g02237 298 SUPERFAMILY Homeodomain-like 237 287 IPR009057 -
Cca09g02237 298 MobiDBLite consensus disorder prediction 99 119 - -
Cca09g02237 298 Gene3D - 234 298 - -
Cca09g02237 298 MobiDBLite consensus disorder prediction 91 125 - -
Cca09g02237 298 PANTHER TRANSCRIPTION FACTOR MAMYB 1 298 - -
Cca09g02237 298 ProSiteProfiles Myb-like domain profile. 233 287 IPR001005 -
Cca09g02237 298 SMART sant 148 201 IPR001005 -
Cca09g02237 298 SMART sant 237 289 IPR001005 -
Cca09g02237 298 SUPERFAMILY Homeodomain-like 150 188 IPR009057 -
Cca09g02237 298 CDD SANT 241 287 IPR001005 -
Cca09g02237 298 Gene3D - 147 204 - -
Cca09g02237 298 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 298 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Cca09g02237 Myb_DNA-binding 9.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02237 - - gsj:114413206 425.631