Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02233 ATGTCTGCCATGAACTCTAGCACTGTCTTGGCCTGTAACTACGCCAGATCAGGATGTTCCGACCTCAACACAAAGCTCACTTCCATGCCTTCGCTTGCATCACCACCAGTATCTTGTCTCAAGTTGCCTGTGATCAAGGCTCAGCATGCTAAAGTCTCTGAATCTAAGTCAAACGATGGAAGGAGAAGTGCCCTTGTTTTCTTGGCAGCTACCCTTTTCACCGCTGCAGCCACTTCTTCTGCCAATGCTGGGATCATTGAAGAATACCTTGAAAAGAGCAAGGCCAACAAGGAACTGAATGACAAGAAAAGGTTAGCCACAACTGGGGCCAATTTTGCAAGAGCATACACTGTGGAATTTGGCACTTGCAAGTTCCCTGAAAACTTCACTGGTTGCCAAGATCTAGCTAAGCAAAAGAAAGTGCCATTTATTTCCGATGATTTGGAGCTTGAATGTGAAGGAAAGGACAAATACAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA 507 0.4497 MSAMNSSTVLACNYARSGCSDLNTKLTSMPSLASPPVSCLKLPVIKAQHAKVSESKSNDGRRSALVFLAATLFTAAATSSANAGIIEEYLEKSKANKELNDKKRLATTGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02233 168 Gene3D - 84 168 IPR044907 -
Cca09g02233 168 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 168 - -
Cca09g02233 168 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 43 168 IPR008796 GO:0009522|GO:0015979
Cca09g02233 168 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 168 IPR008796 GO:0009522|GO:0015979
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02233 1 139 Calmodulin-binding Proteins AT5G64040 63.636 5.42e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02233 K02701 - nnu:104606730 250.751