Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02229 ATGAAAGAAAACAAGCCCTATCTAGTTGTGATTCTCGTACAAGCCATCTACGCTGCCATGTTTCTTCTCTCAAAAGCTGCATTCGACCATGGCATGAACAACTTCATCTTTATTTTCTATAGACAGGCCGTAGCTACCATATTCCTTATCCCCTTCGCTTTCTTCTTTGAGCGGAAAACTGCACCCCCCTTGTCTTTCGTCACTTTCTGGAAGATCTTTTTCCTTTCTCTCCTTGGGATCACTGCGAGCTTGGACATATATGGTATTGCTCTTATTTACACCTCTGCTACTTTGGCTGCTGCTACCACAAACTGCCTTCCAGTCATAACCTTCTTCTTGGCGCTCCTACTAAGGATAGAAGTTTTGAAAGTAAAGAGCGCCCCCGGGGTTGCTAAGTTGGTTGGTGTAATGGCATGCTTGGCTGGAGCAGGAACCCTTGCCTTCTATAAAGGCCCTCGTTTGGAACTATTAAGCCATTATCACCTTTTAGGGTACCATAAAAGCCAACAACATTTGGGTCGTCATGCATCTGCCTCATGGATCAAGGGTTGCTTCCTTATGCTCCTATCCAACACCTTTTGGGGAATGTGGCTTGTGCTACAGACTTTTGTCATAAAAGGGTACCCTTCAAAGCTGCTCCTCACAACTCTCCAGTGTTTCTTAAGCTCAATTCAGTCCTTGGGCATTGCCTTGGCCGTAGAAAGAGACATTGAGCAATGGAAGTTGGGGTGGAATGTCAGACTCCTCGCCGTTGTGTATTGTGGAATTATGGTGACTGGTGTAACGTATTACTTGCAAACATGGGTTATAGAGAAGAAAGGACCAGTGTTTCTAGCCATGTCAACACCCCTGGCTCTGGTCATGACCATCTTCTCCACCGCAATTCTCTTGGGCGAAATAATAACTCTGGGAAGCCTCTTGGGTGGCATCTCTTTGGTCATTGGACTGTACTGTGTTCTGTGGGGAAAGAGCAGAGAGCAAATGCCGAAAGCCTCGTTAGACTTGGAGGAGGCATCGGGTTAA 1023 0.4624 MKENKPYLVVILVQAIYAAMFLLSKAAFDHGMNNFIFIFYRQAVATIFLIPFAFFFERKTAPPLSFVTFWKIFFLSLLGITASLDIYGIALIYTSATLAAATTNCLPVITFFLALLLRIEVLKVKSAPGVAKLVGVMACLAGAGTLAFYKGPRLELLSHYHLLGYHKSQQHLGRHASASWIKGCFLMLLSNTFWGMWLVLQTFVIKGYPSKLLLTTLQCFLSSIQSLGIALAVERDIEQWKLGWNVRLLAVVYCGIMVTGVTYYLQTWVIEKKGPVFLAMSTPLALVMTIFSTAILLGEIITLGSLLGGISLVIGLYCVLWGKSREQMPKASLDLEEASG 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02229 340 PANTHER WAT1-RELATED PROTEIN 7 328 - -
Cca09g02229 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 325 - -
Cca09g02229 340 Pfam EamA-like transporter family 5 129 IPR000620 GO:0016020|GO:0016021
Cca09g02229 340 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Cca09g02229 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 149 - -
Cca09g02229 340 PANTHER WAT1-RELATED PROTEIN 7 328 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02229 Cca-Chr9 47501715 47508762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02229 1 254 Nodulin-like Gene Family AT5G64700 62.791 3.09e-100 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02229 - - ccaj:109799350 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02229 09 47501715 47508762 Cca09g02229 09 47501715 47508762 ECH
Cca09g02229 09 47501715 47508762 Cca03g00139 03 2026224 2031514 PCT