Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02226 ATGGCTAAATCACCCCAAACCCAACTTCCTCTCAAAGCTTTTGGCTGGGCTGCTTCAGACACTTCTGGCATCCTCGCCCCCTTTCATTTTTCCAGAAGGGAAAATGGCCAGAATGACGTCACTCTCCAGATTCTCTACTGCGGTGTTTGCCATTCCGATCTCCACACTCTCAAAAACGACTGGGGTTTCACCACTTACCCTGTCGTTCCTGGGCATGAAATTGTTGGTGTTGTGACAAAAATTGGAAACAATGTAAAAAATTTCAAAGTGGGGGACAAAGTTGGAGTTGGTGTGATAGTGGAGTCTTGTAAGGAATGTGAGTGTTGCCAACAGGATCTGGAGAGTTACTGTCCCAAACCTGTGTTTACCTATAACTCTCCTTATTATGATGGGACACGAACTCAAGGTGGTTATTCTAATTTCGTGGTTGTTCACCAGCGTTATGTGCTCCGATTTCCTGAGAACTTACCCCTTGATGCTGGTGCTCCACTTCTGTGTGCTGGGATCACTGTGTATAGCCCAATGAAATATTATGGGATGACAGAGGCAGGCAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGCCATGTTGCAATCAAATTTGCTAAGGCGTTTGGGCTTAAAGTTACTGTCATTAGTTCATCCCCAAACAAGGAAGATGAGGCCATTAAAAGGCTTGGGGCTGATTCTTTCCTTGTTTCCTCAGACCCTGCGAAAATGAAGGCTGCTATGGGAACCATGGACTATATCATAGACACAATTTCTGCAGTTCATTCCCTGATTCCACTGCTTGGTCTGCTGAAGCTGAACGGGAAACTGGTTACTGTAGGGTTGCCTAACAAGCCCCTTGAGCTGCCTATCTTTCCGTTAGTTGCAGGACGGAAGCTTGTTGGGGGGAGCAACTTTGGTGGGATCAAGGAAACCCAGGAAATGCTTGATTTCTGCGGAAAGCACAACATATCTGCGGATATTGAGCTGATTAAGATGGACCACATCAACACAGCCATGGAAAGGCTTAGCAAATCTGATGTCAAATATCGCTTTGTGATTGATGTGGCGAACTCTTTCTCAAGTTTGTAG 1083 0.4598 MAKSPQTQLPLKAFGWAASDTSGILAPFHFSRRENGQNDVTLQILYCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTKIGNNVKNFKVGDKVGVGVIVESCKECECCQQDLESYCPKPVFTYNSPYYDGTRTQGGYSNFVVVHQRYVLRFPENLPLDAGAPLLCAGITVYSPMKYYGMTEAGKHLGVAGLGGLGHVAIKFAKAFGLKVTVISSSPNKEDEAIKRLGADSFLVSSDPAKMKAAMGTMDYIIDTISAVHSLIPLLGLLKLNGKLVTVGLPNKPLELPIFPLVAGRKLVGGSNFGGIKETQEMLDFCGKHNISADIELIKMDHINTAMERLSKSDVKYRFVIDVANSFSSL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02226 360 PANTHER ALDEHYDE REDUCTASE 12 357 - -
Cca09g02226 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Cca09g02226 360 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 12 357 - -
Cca09g02226 360 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Cca09g02226 360 Gene3D - 16 353 - -
Cca09g02226 360 CDD CAD1 14 352 - -
Cca09g02226 360 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Cca09g02226 360 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Cca09g02226 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Cca09g02226 360 Gene3D - 167 323 - -
Cca09g02226 360 SUPERFAMILY GroES-like 23 185 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02226 Cca-Chr9 47457847 47461469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02226 12 357 Monolignol Biosynthesis Gene Families AT2G21730 72.126 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02226 K00083 - gmx:100819684 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02226 09 47457847 47461469 Cca09g02226 09 47457847 47461469 ECH