Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02181 ATGAACCTTGTTTTTGCTAGTAGACCACCTCATGAAGCTGGAAAGTACATTCTTTGGGAGCAAAGGAACTTGGGTTTTTCTAAATATGGTTCTTATTGGCGCAACATGCGTAAGATGTGCACGTTGGAATTGCTAAGTCAGACCAAAATAAACTCCTTCCAACCCATGAGGGAAGAAGAACTTGACCTATTGATTAAGCGTCTAAGAGAGGCAGCCAATGATGGAGATGTTGTTGACGTGAGTGCCAAGGTTGCAACACTCAGTGCAGACATGTCTTGTAGAATGATTTTCGGGAAGAAGTATATGGACAAAGAGTTGGGTCAGAAAGGGTTCAAGGCAGAGGTTCAAGAGCTAATGCACTTAGTAGCAATTCCTAACTTAAGTGATTACATTCCTTACATTGGTAAACTTGACCTTCAAGGGCTAATCAAGCGTATGAAGGCAGTGCACAAAATCTTTGATGACTTCTTTGACAAAATCATTGATGACCATATTCAATCGGAGAAGGGAGAAGGCAAGGTGAAGGATTTTCTTGATGTCATGTTGAGCTTTATCGGTATGGAGGAATCTGAGTACCGCGTTGAACGACCCAATATCAAAGCCATATTGCTGGATATGTTGATTGGCTCAATGGATACTTCTGCTACAGCAATTGAGTGGACAATTTCAGAGTTACTAAAGAATCCAAGGGCTATGAAAAAAGTCCAAATGGAGTTGGAAACTGTGGTGGGTATGAAGAGGAAGGTGGAGGAATCAGACTTAGACAAGTTGGAGTATTTGGATATGGTTATAAAGGAAAGCATGAGAATCCATCCAGTGGCACCTTTACTAATACCACACTATTCGAGGGAAGATTGCATGGTTGGAGATTTCTTCATTCCTAAAGATTCAAGGATCATTATAAATTCATGGGCAATAATGCGAAACCCAAGTGTTTGGTATGAGGCTGAGAAATTTTGGCCAGAGAGATTTGATGGAAACAACGTAGATGTAAGAGGTCATGACTTCCGATTGATACCATTTGGGTCTGGTAGAAGAGCTTGTCCAGGATTGCAATTAGGTCTCACTATTGTTCGTCAAACAATAGCCCAACTTGTGCACTGTTTTGATTGGAAGCTACCAAATGACATGTTGCCAGCTGACTTGGACATGACCGAAGAGTTTGGACTCACGATGCCTAGGGCCAATCATCTACTTGCAATTCCATCGTATCGCCTTCATGGTGAAAATGATTAG 1236 0.415 MNLVFASRPPHEAGKYILWEQRNLGFSKYGSYWRNMRKMCTLELLSQTKINSFQPMREEELDLLIKRLREAANDGDVVDVSAKVATLSADMSCRMIFGKKYMDKELGQKGFKAEVQELMHLVAIPNLSDYIPYIGKLDLQGLIKRMKAVHKIFDDFFDKIIDDHIQSEKGEGKVKDFLDVMLSFIGMEESEYRVERPNIKAILLDMLIGSMDTSATAIEWTISELLKNPRAMKKVQMELETVVGMKRKVEESDLDKLEYLDMVIKESMRIHPVAPLLIPHYSREDCMVGDFFIPKDSRIIINSWAIMRNPSVWYEAEKFWPERFDGNNVDVRGHDFRLIPFGSGRRACPGLQLGLTIVRQTIAQLVHCFDWKLPNDMLPADLDMTEEFGLTMPRANHLLAIPSYRLHGEND 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02181 411 Gene3D Cytochrome P450 2 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02181 411 PRINTS E-class P450 group I signature 87 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02181 411 PRINTS E-class P450 group I signature 348 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02181 411 PRINTS E-class P450 group I signature 198 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02181 411 PRINTS E-class P450 group I signature 261 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02181 411 PRINTS E-class P450 group I signature 218 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02181 411 PRINTS E-class P450 group I signature 302 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02181 411 PRINTS E-class P450 group I signature 338 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02181 411 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 341 350 IPR017972 GO:0005506|GO:0016705
Cca09g02181 411 PRINTS P450 superfamily signature 209 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02181 411 PRINTS P450 superfamily signature 339 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02181 411 PRINTS P450 superfamily signature 262 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02181 411 SUPERFAMILY Cytochrome P450 4 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02181 411 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 407 - -
Cca09g02181 411 PANTHER CYTOCHROME P450 93A3-LIKE 2 407 - -
Cca09g02181 411 Pfam Cytochrome P450 7 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02181 Cca-Chr9 46990690 46992588 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02181 4 406 Monolignol Biosynthesis Gene Families AT4G36220 39.430 1.69e-107 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02181 K20562 - gmx:100781617 689.108