Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02179 ATGATTTGGATAGTAATTTTTGTAGTTTCTCTTACTTACCTGTGTCTATGGAGACTCAAGAGAAAGGAAAAGAGATTTCCGCCTGGTCCAATGGGGTGGCCAATTTTAGGGAGCCTTCACTTGTTAGGAGCAAATCCTTACCGTGATCTGCATGAATTAGCTAAAAAGTATGGACCTATCATGTACTTACGTTTAGGTTTTGTTCCCACCATTGTTGTTTCTTCACCACAGGCTGCTGAACTTTTTCTCAAGACCTATGACCTTGTCTTTGCTAGTAGACCACCCCTTGAGGCTGCAAAGTACATTGTTTGGGAGCAGAGGAACTTGGCCTTTGGTGAATATGGTTCTTACTGGCGCAACATACGTAAGATGTGCACGTTGGAATTGTTAAGTCAAACCAAAATTAACTCCTTCAGATCCATGAGGGAAGAGGAACTTGACTTGTTGATCAAGCTTCTAGGAGAGGCAGCCAATGATGGAGTTGCTGTTGATGTCAGTGCCAAGGTTGCAACACTCAGTGCAAACATGTCTTGTAGAATGATTTTAGGAAAAAAGTACATGGATCAGGACTTAGATGAGAAGGGGTTCAAGGCTGTGATGCAAGAGGCTATGTACTTGGCAGCAGCTCCTAACATTGGTGATTACATTCCTTACATCAGTAAACTTGACCTTCAAGGACTAATCAAGCGTATGAAGGTATTGCGAAAAATCTTTGATGACTTCTTTGACAAAATTATTGAAGAGCATATTCAATTGGAGAAGGGAGAAGACAAGGTGAAGGATTTTGTGGATGTCATGTTAGGCTTTGTTGGTACTGAAGAATCTGAGTACCGAACTGAACGCTCCAATATCAAAGCCATATTGCTGGATATGTTATTGGGTTCAATGGATACTTCTGCTACAGCAATTGAGTGGACACTTTCAGAGCTCTTAAGGAATCCAAGAGTGATGAAGAAAGTCCAAATGGAATTGAAAAATGTGGTAGGTATGAAGAGGAGGGTGGAGGAATCAGACTTGGACAAGTTGGAGTATTTGGACATGGTCATAAAGGAAAGTATGAGACTTCATCCGGTGGGACCTTTACTAATACCACACTATTCAAGAGAAGATTGCATGGTTGGAGAATTTTTCATTCCTAAAGAAGCAAGGGTGATAGTAAATGCATGGGCAATTATGCGAGACCCCAGTGTTTGGGATGAGGCAGAAAAGTTCTGGCCAGAGAGATTTGAAGGAAGCAACATAGATATGAGAGGACATGACTTTCAATTGATACCATTTGGATCTGGCAGAAGAGGCTGTCCAGGAATGCAATTGGGATTAACCGTGATTCGTATAACACTTGCTCAACTTGTACATTGTTTTAATTGGAAACTGCCAAATGACATGTTGCCATATGACTTAGACATGACAGAAGAATTCGGACTCACAATGCCCAGAGCGAACCATCTTGTTGCCATTCCAACCTATCGCCTTCACGATGAAAGGGATTAG 1491 0.4158 MIWIVIFVVSLTYLCLWRLKRKEKRFPPGPMGWPILGSLHLLGANPYRDLHELAKKYGPIMYLRLGFVPTIVVSSPQAAELFLKTYDLVFASRPPLEAAKYIVWEQRNLAFGEYGSYWRNIRKMCTLELLSQTKINSFRSMREEELDLLIKLLGEAANDGVAVDVSAKVATLSANMSCRMILGKKYMDQDLDEKGFKAVMQEAMYLAAAPNIGDYIPYISKLDLQGLIKRMKVLRKIFDDFFDKIIEEHIQLEKGEDKVKDFVDVMLGFVGTEESEYRTERSNIKAILLDMLLGSMDTSATAIEWTLSELLRNPRVMKKVQMELKNVVGMKRRVEESDLDKLEYLDMVIKESMRLHPVGPLLIPHYSREDCMVGEFFIPKEARVIVNAWAIMRDPSVWDEAEKFWPERFEGSNIDMRGHDFQLIPFGSGRRGCPGMQLGLTVIRITLAQLVHCFNWKLPNDMLPYDLDMTEEFGLTMPRANHLVAIPTYRLHDERD 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02179 496 Gene3D Cytochrome P450 17 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PANTHER CYTOCHROME P450 93A3-LIKE 2 492 - -
Cca09g02179 496 Pfam Cytochrome P450 27 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 492 - -
Cca09g02179 496 SUPERFAMILY Cytochrome P450 27 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02179 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02179 Cca-Chr9 46949959 46952060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02179 33 491 Monolignol Biosynthesis Gene Families AT4G36220 41.090 3.10e-127 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02179 K20562 - gmx:100809526 842.032