Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02177 ATGGATTTGAGAGGTCGAGACTTCCAGCTAATACCATTTGGGTCTGGCAGAAGGATCTGTCTAGGAATGCAACTGGCTCTAACTATGGTTCGTCTGATAGTGGCTCAGCTTGTGCATTGTTTTGATTGGAAGCTGCCAAATGACATGTTACCATCTGACTTGGACATGACAGAGGCGTTTGGCCTTGCAATGCCTAAAGCCAATCATTTGCTTGCCATTCCTACCTATTGA 231 0.4545 MDLRGRDFQLIPFGSGRRICLGMQLALTMVRLIVAQLVHCFDWKLPNDMLPSDLDMTEAFGLAMPKANHLLAIPTY 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02177 76 Pfam Cytochrome P450 6 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02177 76 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 13 22 IPR017972 GO:0005506|GO:0016705
Cca09g02177 76 SUPERFAMILY Cytochrome P450 4 73 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02177 76 PRINTS E-class P450 group I signature 10 20 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02177 76 PRINTS E-class P450 group I signature 20 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02177 76 PANTHER CYTOCHROME P450 93A3-LIKE 1 76 - -
Cca09g02177 76 Gene3D Cytochrome P450 1 72 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02177 76 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02177 Cca-Chr9 46923092 46923322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02177 2 75 Monolignol Biosynthesis Gene Families AT4G36220 58.108 7.60e-27 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02177 - K20562 pvy:116138068 131.724