Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02163 aTGGCACTCTCACTCTCCTCCTCCTGTGTACGCGTTCCTTCATGTTTTTGGAAACAAAACGGCAAGAGTTGCAAAGCGGCTCCTAAGGTGTCACGTGATAACAAGAATCCATTGCTCGGAATTGGTATTGGGGTCGTAACGGCTTGCGTGATGGGTTTAACGGCGTTGGACGCCGACGCCACCAGAATCGAATACTACGCTACCGTGGGAGAGCCTTTGTGTGAGTACAACTACGTTAAGTCTGGCCTCGGCTACTGCGACATCGCTGAGGGCTTCGGTGACGAAGCTCCATACGCTGAGCTTATCAATATTCACTATACTGCAAGGTTCGCTGATGGAACAGTCTTTGATAGCAGTTACAAACGTGCTAGACCTCTCACCATGCGCATTGGTGTTGGCAAGGTTATCAAGGGATTGGATCAGGGAATTTTGGGGGGTGAAGGAGTACCTCCAATGCGAATAGGTGGGAAACGCAAACTGCAGATTCCTCCACACTTAGCATATGGCCCTGAACCTGTGGGCTGCTTCTCAGGTGACTGCAATATACCCGGCAACGCCACTCTTCTGTATGATATTAATTTTGTTGAGCTTTATTCGGGGAACAGATCAAAGTGA 615 0.4927 MALSLSSSCVRVPSCFWKQNGKSCKAAPKVSRDNKNPLLGIGIGVVTACVMGLTALDADATRIEYYATVGEPLCEYNYVKSGLGYCDIAEGFGDEAPYAELINIHYTARFADGTVFDSSYKRARPLTMRIGVGKVIKGLDQGILGGEGVPPMRIGGKRKLQIPPHLAYGPEPVGCFSGDCNIPGNATLLYDINFVELYSGNRSK 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02163 204 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 99 193 IPR001179 GO:0003755
Cca09g02163 204 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 99 198 IPR001179 GO:0003755
Cca09g02163 204 SUPERFAMILY FKBP-like 76 196 - -
Cca09g02163 204 Gene3D - 72 196 IPR046357 GO:0003755
Cca09g02163 204 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 22 202 IPR044183 GO:0009507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02163 Cca-Chr9 46768260 46770266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02163 75 199 Calmodulin-binding Proteins AT3G25230 37.795 3.28e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02163 K01802 - gmx:100500547 384.415