LGRPv2

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Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca09g02159	ATGCAGAGAAGAGAGTTCTCCCAAACACTTCAATCAAATATGGCTTCATCGATGGTAGTGGTGGACACTGAGAAGGTGCCTTCAGAACACTACGAAAGGTCTCAGTGGGTGCTCAATGCTCCTGATCCCCCCACTACGTGCCACAACTTGATGGCTTCTGTCACCAACACTATCTCACCTTACCAAAATATCTTTTCTTCTCAAAGACTTGTACTTTCCTTCTTGCGGGGCATTTTTCCTATTCTTCGTTGGGGTCAAAGTTACACACAAACCAAATTCAGGAACGATTTACTTGCAGGTCTAACCATTGCAAGTCTCTGCATTCCTCAGAGCATTGGGTATGCCACTTTAGCAAAGCTTGATCCTGAATATGGACTCTATACGAGTGTGGTGCCACCTCTTATATATGCTGTAATGGGAAGTTCAAGAGAAATAGCGATTGGACCGGTGGCTGTGGTATCGCTTCTTTTGTCATCAATGATTGAGAAGTTAATAGATCCTGGCATTGATCCAAATGGTTACAGAAAGCTTGTTTTCACTGCCACTTTCTTTGCTGGTGTATTTCAAGCTGCTTTTGGACTCTTCAGGTTGGGGTTCATTGTGGATTTTCTGTCTCATGCTGCTATTGTTGGATTCATGGCGGGAGCAGCTATAATAATTGGTCTTCAACAGCTGAAGGGACTATTTGGGATCAATCATTTTACCAACAAAACAGACATAATCTCTGTCATCAAATCCGTCTGGGAATCGGTTCATCATCCATGGAATCCTCGCAATTTTGTCCTGGGATGTTCATTCTTCATTTTCATCCTGTTTACCAGATTTCTGGGTAAAAGGAATAGGAAACTGTTCTGGTTGCCAGCAATATCCCCACTTGTATCAGTTATGATATCAACTCTTGTTGTTTTTCTGACACGATCTGACAAAAGTGGAGTTAACATAGTGAGACACATCAAAGGAGGACTCAATCCAATCTCTATCAATCAGATTGAGTTCAATAGCCCCCATATTGGAGCATTGGCCAAAATTGGACCAGTTCTTGCTGCTGTTGCACTCACTGAATCAGTTTCTGTTGGCCGATCTTTTGCATCCATGAAAGGATACCATCTTGATGGAAACAAGGAAATGGTGTCATTAGGCTTCATGAACATCATAGGATCCTTCACCTCTTGCTACGTTGCAACTGGTTCTTTCTCCCGCACGGTGGTTAATTTCAGTGCGGGTTGTGAAACATTAGCGTCAAACATTGTGATGGCCATAGTGGTGATGATATCACTACAATGTTTGACGAAATTACTGTACTTTACCCCAACTGCTATTCTGGCTTCAATAATCCTTTCAGCACTCCCGGGACTCATAGACATCAATGAAGCTTACAGAATATGGAAAGTTGATAAGCTTGATTTCCTTGCTTGCATTGGAGCCTTCTTCGGGGTTCTCTTTGCGTCAGTGGAAATTGGTCTGCTAGTGGCAGTGACAATATCTTTGACAAAGATAATTTGGATCTCAATTGGAGCAGGCACAGAAACTTTGGGAAGACTACCCGGCACAGATGTGTTCTGCAATGTACAACAGTATCCTATGGCTGTTAAGACTCCTGGAGTTGCAATAATACGCGTAAAGTCTGCATTGCTTTGCTTTTCTAACGCCAATTCAGTCAGAGAAAGGATCCTGAAGTGGATCACTAGGGAAGAGGCAGAGAGGAACACGGAAGGCAACATCAGTAGCATAATTCAGCTCGTAATCCTTGACACCTCCAATTTGGTGAGCATCGACACCTCAGGAATTGCTTCTCTAGAGCAACTAAATAAGAGTTTGGTCTCAAATGGGAAACAGCTAGCAATTGCCAATCCAAGTTGGCAAGTGATTTACAAGCTGAAGGCGACCAACTTTGTGACAAGAATTGGAGGAAGGGTCTTCTTGACTATTGGAGAAGCTATTGACTGCAAGCTGGATTTCTAA	1962	0.4286	MQRREFSQTLQSNMASSMVVVDTEKVPSEHYERSQWVLNAPDPPTTCHNLMASVTNTISPYQNIFSSQRLVLSFLRGIFPILRWGQSYTQTKFRNDLLAGLTIASLCIPQSIGYATLAKLDPEYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSMIEKLIDPGIDPNGYRKLVFTATFFAGVFQAAFGLFRLGFIVDFLSHAAIVGFMAGAAIIIGLQQLKGLFGINHFTNKTDIISVIKSVWESVHHPWNPRNFVLGCSFFIFILFTRFLGKRNRKLFWLPAISPLVSVMISTLVVFLTRSDKSGVNIVRHIKGGLNPISINQIEFNSPHIGALAKIGPVLAAVALTESVSVGRSFASMKGYHLDGNKEMVSLGFMNIIGSFTSCYVATGSFSRTVVNFSAGCETLASNIVMAIVVMISLQCLTKLLYFTPTAILASIILSALPGLIDINEAYRIWKVDKLDFLACIGAFFGVLFASVEIGLLVAVTISLTKIIWISIGAGTETLGRLPGTDVFCNVQQYPMAVKTPGVAIIRVKSALLCFSNANSVRERILKWITREEAERNTEGNISSIIQLVILDTSNLVSIDTSGIASLEQLNKSLVSNGKQLAIANPSWQVIYKLKATNFVTRIGGRVFLTIGEAIDCKLDF	653

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca09g02159	653	ProSiteProfiles	STAS domain profile.	545	650	IPR002645	-
	Cca09g02159	653	ProSitePatterns	SLC26A transporters signature.	122	143	IPR018045	GO:0008271\|GO:0008272
	Cca09g02159	653	TIGRFAM	sulP: sulfate permease	80	639	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
	Cca09g02159	653	Pfam	Sulfate permease family	93	473	IPR011547	GO:0016021
	Cca09g02159	653	PANTHER	SULFATE TRANSPORTER	24	649	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
	Cca09g02159	653	Pfam	STAS domain	526	646	IPR002645	-
	Cca09g02159	653	Gene3D	STAS domain	507	650	IPR036513	-
	Cca09g02159	653	SUPERFAMILY	SpoIIaa-like	530	648	IPR036513	-
	Cca09g02159	653	PANTHER	LOW AFFINITY SULFATE TRANSPORTER 3-LIKE	24	649	-	-
	Cca09g02159	653	CDD	STAS_SulP_like_sulfate_transporter	526	641	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca09g02159	Cca-Chr9	46732186	46739306	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca09g02159	8	648	Inorganic Solute Cotransporters	AT5G10180	64.760	0.0	867

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca09g02159	K17469		-	gmx:100775538	1117.06

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