Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02152 ATGTGCATTAATAGTACCCTCCAACACAACCTCGCATGGCCAACACGCGGCACTCACAGCACTCACAGTTCCATTTCCTCAGCACGACCAAAACACCTTTTTCTCATACCGACTTTTGAAGAAGCAAGGAGGAATATATTCACAGAAATCATGGTGGAGATTCACGAAGAAATCAACCCCTTCgatgaagaagaaaatgaagaggaagaaATCGACTACGACCAGCTTAAGAAGCGCATGTGGAAGGATCGGATCCTGCTGCAGAAGCTAAAGGGAAAACGCCCCAAAGAAGAGCCAGACCAAGAAGCAAAACAAGAAGCATCTAGGCGGAAGAAGATGTCAAGAGCACAAGATTCAATCCTCAAGTACATGGTGAAGATAATGGAAGTTTGCAATGCTCAAGGTTTTGTGTATGGAATTGTCCCCGAGAAGGGTAAGCCAGTGACCGGTTCTTCTGACAGCTTGCtcatcaaacacatgtctcctgatgtggacaaacttaaaaggttggtgactcagtccaagactttgcaagataagatgacagccaaggacacagcaacttggtccaaggttatgaaccaagaagaagcTTTGCTACAACTTACCAATAAGTGCCTCAAGATATCTCCATCTGATGAAGATGAGAGCGAGCGTGAAAGCTCTACTGGTACTTCACATGAAGGGAGTTGTGTAGTTGAGTTGAATGATGGCCCCAATTTAGGCGGCAGCAATGAGAAAAGGAAGAGTGTGTTTGACTTAGATGCCGCTTTTGATAAGCTATATGCTTGTCAATACTCTCAGTGTCCACAAAGTGAATTGGATATGGGATTTCCTGACAAAAACTCAAGGATGAACCATGAATCCCTTTGTGCTTACCGCAATAACCAAAGTCCTTTTCTCCTTCATGATCATCCTAACAATGAAACACAACTTCCAAGTGTGGACGATTGGATGAACATGGTAGCAAGAGGTAATCAGAATGAGAACAACATTGTTGGGTATCTGAATGATCAGTTGAGAGAGATTGCAGGAAAGACACCCGAAGATTATGGAGGCTTATGGCTAAATGCCCTTGAAGATCTCGAGTTTCAAGCTGCACTGGATCAGATGGAAATAGACTTGAATCATAATCATGAGCAAGATACCCTACAAGGCCAAGAACTAACCTCAATTTGGGACTTAACTTACAAATAA 1197 0.3776 MCINSTLQHNLAWPTRGTHSTHSSISSARPKHLFLIPTFEEARRNIFTEIMVEIHEEINPFDEEENEEEEIDYDQLKKRMWKDRILLQKLKGKRPKEEPDQEAKQEASRRKKMSRAQDSILKYMVKIMEVCNAQGFVYGIVPEKGKPVTGSSDSLLIKHMSPDVDKLKRLVTQSKTLQDKMTAKDTATWSKVMNQEEALLQLTNKCLKISPSDEDESERESSTGTSHEGSCVVELNDGPNLGGSNEKRKSVFDLDAAFDKLYACQYSQCPQSELDMGFPDKNSRMNHESLCAYRNNQSPFLLHDHPNNETQLPSVDDWMNMVARGNQNENNIVGYLNDQLREIAGKTPEDYGGLWLNALEDLEFQAALDQMEIDLNHNHEQDTLQGQELTSIWDLTYK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02152 398 PANTHER ETHYLENE INSENSITIVE PROTEIN 52 155 - -
Cca09g02152 398 PANTHER ETHYLENE INSENSITIVE PROTEIN 156 397 - -
Cca09g02152 398 MobiDBLite consensus disorder prediction 209 246 - -
Cca09g02152 398 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 156 397 IPR006957 GO:0005634
Cca09g02152 398 SUPERFAMILY DNA-binding domain of EIN3-like 155 200 IPR023278 GO:0003700|GO:0005634
Cca09g02152 398 Gene3D - 155 206 IPR023278 GO:0003700|GO:0005634
Cca09g02152 398 Gene3D - 102 154 IPR023278 GO:0003700|GO:0005634
Cca09g02152 398 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 52 155 IPR006957 GO:0005634
Cca09g02152 398 MobiDBLite consensus disorder prediction 209 223 - -
Cca09g02152 398 Pfam Ethylene insensitive 3 75 155 IPR006957 GO:0005634
Cca09g02152 398 Pfam Ethylene insensitive 3 156 197 IPR006957 GO:0005634
Cca09g02152 398 MobiDBLite consensus disorder prediction 90 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02152 Cca-Chr9 46656777 46658660 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02152 154 325 EIL Transcription Factor Family AT5G10120 41.111 6.32e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Cca09g02152 EIN3 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02152 K14514 - gmx:100800288 290.812