Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02146 ATGACACAGCAGAATGTGGTAGCGTCCAAGACAAAATCGAGGATGAACAGGGATAAAACCGTGGCGAAAAAGCCACCGGCGGCGCCGGGGTACATTCCCATTCCGAGTAGGGTTCTGAAGAACCTCGAAAACAATGGTGGACAAAGAATCAGTGCATGGGTTGATTCCATGAGAGCCTCTTCTCCCACCCGTGTCAAATCCACTTCTTCTTTGGCCGAAGAACACAGCTCTTGGATTCTTCGCCACCCTTCGGCATTAGACATGTTTGAGCAAATAATGGATGCGTCCAAGGGAAAGCAAATCGTCATGTTCCTCGACTATGATGGTACCTTGTCGCCTATTGTTGATGATCCCGACCGTGCTTTCATGTCGGATTCGATGAGGAAAACGGTGAGGAAACTTGCAAGCTGTTTTCCTACTGCCATAGTTACCGGCAGATGCAGAGACAAGGTTTACAATTTTGTTCGCTTGGCTGAGCTATATTATGCTGGAAGCCATGGCATGGATATTCAAGGGCCAACAGGAGACTCCAAATACAACAAAGACAAAGGAGATGGAGTTCTTTTTCAACCCGCCAGTGAATTTCTTCCCATGATAGACGAGGTGTACCATCAATTGGTTGAGAAAATGAAATCTATTCCTGGAGCCAGGGTGGAGAACAACAAGTTTTGTGTCTCTGTTCATTTTCGCTGCGTTGATGAAAAGAAATGGAGTGAACTGGCACAGCAAGTGAGATCGGTGTTAAAAGAGTACCCGAAACTTCGTCTTAACCAAGGAAGGAAGGTATTGGAGATTCGTCCCTCTATTAAATGGGACAAAGGGAAGGCACTAGAGTTTTTGTTAGAGTCACTTGGATTTGCCAACTGTAACGATGTCTTTCCTGTTTACATTGGAGATGATAAAACCGATGAAGATGCGTTCAAGAAATTAAGAGACAGAGGACAAGGTTTTGGTATTCTAGTCTCGAAATTTCCAAAGGTCACTACTGCATCATACTCTTTACAAGAACCAAACGAGGCAAGTATAATTTGGCTAATTTCCTTATTTCATCTATTTTTGTTCCATCGTATCATGTGCATAAAATTAAAACATGCCttatttatttatttatattcatttatttgtttCATGCAGGTGATGGATTTCCTTCAACGTTTGGTGGATTGGAAACAAGTATCTCTCCGACTCCGACCACGTTCCCGGGTGTAA 1209 0.4301 MTQQNVVASKTKSRMNRDKTVAKKPPAAPGYIPIPSRVLKNLENNGGQRISAWVDSMRASSPTRVKSTSSLAEEHSSWILRHPSALDMFEQIMDASKGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRKLASCFPTAIVTGRCRDKVYNFVRLAELYYAGSHGMDIQGPTGDSKYNKDKGDGVLFQPASEFLPMIDEVYHQLVEKMKSIPGARVENNKFCVSVHFRCVDEKKWSELAQQVRSVLKEYPKLRLNQGRKVLEIRPSIKWDKGKALEFLLESLGFANCNDVFPVYIGDDKTDEDAFKKLRDRGQGFGILVSKFPKVTTASYSLQEPNEASIIWLISLFHLFLFHRIMCIKLKHALFIYLYSFICFMQVMDFLQRLVDWKQVSLRLRPRSRV 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02146 402 Gene3D - 183 268 - -
Cca09g02146 402 SUPERFAMILY HAD-like 102 350 IPR036412 -
Cca09g02146 402 Gene3D - 103 334 IPR023214 -
Cca09g02146 402 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 343 IPR044651 GO:0004805|GO:0005992
Cca09g02146 402 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 343 - -
Cca09g02146 402 TIGRFAM T6PP: trehalose-phosphatase 99 339 IPR003337 GO:0003824|GO:0005992
Cca09g02146 402 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 103 313 IPR006379 -
Cca09g02146 402 CDD HAD_TPP 102 337 - -
Cca09g02146 402 Pfam Trehalose-phosphatase 104 337 IPR003337 GO:0003824|GO:0005992
Cca09g02146 402 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02146 Cca-Chr9 46564454 46567712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02146 97 310 Trehalose Biosynthesis Gene Families AT1G70290 27.111 2.34e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02146 K01087 - gmx:100788735 624.009