Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02102 ATGCCGTTCATGGCCGGCGGTTCATGCCTCCACATATTGAAAGTCGCGCATCCCGATGGTTTTGAAGAGGTTGTCATTGCAACCATTCTCAAAGAGGTATTGAAGGGTTTGGAGTATCTTCACCATCACGGACACATCCACTGTGACGTCAAAGCCGGTAACATTCTCATTGATTCGCGCGGCACCGTTAAACTCGGCGATTTCGGTGTTTCTGCCTGCCTATTAGATTCCGGCGACCTTGGTGCGAAAAGCACTTTAAGGTCGGCACGAACCTTGGTGCGAAGAGCACTTTAA 294 0.5 MPFMAGGSCLHILKVAHPDGFEEVVIATILKEVLKGLEYLHHHGHIHCDVKAGNILIDSRGTVKLGDFGVSACLLDSGDLGAKSTLRSARTLVRRAL 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02102 97 Gene3D Transferase(Phosphotransferase) domain 1 1 93 - -
Cca09g02102 97 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02102 97 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 83 - -
Cca09g02102 97 SUPERFAMILY Protein kinase-like (PK-like) 1 77 IPR011009 -
Cca09g02102 97 Pfam Protein kinase domain 1 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02102 97 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02102 Cca-Chr9 46029801 46030094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02102 1 79 MAP Kinase Kinase Kinase Kinase AT1G79640 79.747 9.18e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Cca09g02102 Pkinase 2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02102 K08835 - ccaj:109808241 190.66