Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02090 ATGAATTGGGTTCGCGGAGCCTCTATTGGCCGTGGAAGCTTTGCCACCATCAACATCGCCATTCCCACAAACGATTCCACTCACTTTCCTTCTCCTTTTGTCGTCAAATCCTCCAACACTCACACTTCCCACATGCTCAACAACGAGAAACATGTCCTCCACAACCTAGGATCTTCCCCATACATAATCACCTGTTTCGGCGACGACCACACCGTCGAAAACGGCCAAGAGTTCCACAACCTTTTCCTCGAGCACGCCGCCGGAGGTTCCCTCGCCGACCACCTCGACAACCACGGCGGCAGGTTCCCGGAGCCACACGTGCGGCGATACACGAGGACCATAGCAGAAGCTCTGAAGCACGTGCACGCGCGCGGCTTCGTCCACTGCGACGTGAAGCTCCAGAACATTCTCGTTTTCGACGAGGGCAACGTTGTTAAGATCGCGGACTTCGGGCTCGCGAAGGCGAGAGGGGAGAAATATGCGAAGAGCGAGTGCAGGGGGACGCCGCTGTTCATGTCGCCGGAGTCGGTGAACGACAACGAGTACGAGCCGCCGGCGGATGTGTGGGCCCTCGGCTGCGCCGTCGTGGAGATGGTTACCGGAAAACCTGCATGGGAGGTTGGCAGCGGGTCGAATATATGGTCGTTGTTGATTCGAATTGGGGTGGGAGACGAGTTGCCGAAGATTCCAGAAGAGTTGTCGCAAGAGGGGAAGGATTTTCTTGGGAAGTGTTTCGTTAAGGATCCGAAGAAGCGGTGGAGCGCTGAGATGCTTCTCAACCACCCTTTCATTGCCCATCAATATGATCACACTGTTTCATTAGACAAAGTGAAGGACCCGTTACCGTCACCGAGTACCCACTTCGATTTTCCTCACTGGGCTTCCACCCCAACGCTTTCTCTTCCTTCTTCCCCGGATTGGTCAGAATCCGACGGATGGATTAATGTTAGATGA 954 0.5493 MNWVRGASIGRGSFATINIAIPTNDSTHFPSPFVVKSSNTHTSHMLNNEKHVLHNLGSSPYIITCFGDDHTVENGQEFHNLFLEHAAGGSLADHLDNHGGRFPEPHVRRYTRTIAEALKHVHARGFVHCDVKLQNILVFDEGNVVKIADFGLAKARGEKYAKSECRGTPLFMSPESVNDNEYEPPADVWALGCAVVEMVTGKPAWEVGSGSNIWSLLIRIGVGDELPKIPEELSQEGKDFLGKCFVKDPKKRWSAEMLLNHPFIAHQYDHTVSLDKVKDPLPSPSTHFDFPHWASTPTLSLPSSPDWSESDGWINVR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02090 317 MobiDBLite consensus disorder prediction 298 317 - -
Cca09g02090 317 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 298 - -
Cca09g02090 317 Pfam Protein kinase domain 6 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02090 317 Gene3D Transferase(Phosphotransferase) domain 1 2 290 - -
Cca09g02090 317 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 298 - -
Cca09g02090 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Cca09g02090 317 SMART serkin_6 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02090 317 CDD STKc_MAPKKK 2 264 - -
Cca09g02090 317 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Cca09g02090 317 SUPERFAMILY Protein kinase-like (PK-like) 3 305 IPR011009 -
Cca09g02090 317 ProSiteProfiles Protein kinase domain profile. 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02090 Cca-Chr9 45921998 45923697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02090 1 317 MAP Kinase Kinase Kinase AT5G67080 51.884 6.80e-119 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Cca09g02090 Pkinase 9.6e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02090 - - aprc:113869133 461.07