Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02047 ATGGCTTTGTCTTCTCAAATACTTGTTCATTATGCCTTATTACTCATTCTCCTCCCTCTTCAGTTACACAACCTTCTGGTTGGTGTATCATCAGCCACTTTAAGCATAACCACAGACGCAGAAGCATTGATCTCATTCAAGTCTCAACTCAGTAATGAGACTCTCAACACCTTATCTTCTTGGAACCATAACTCTTCCCCTTGCAATTGGACTGGTGTCCTGTGTGACAGGCTTGGCCAAAGAGTAACAGGCCTGGACCTTTCAGGCTTGGGTCTCTCAGGCCACTTAAGCCCTTATATTGGCAACCTCTCCTCTCTTCAAACACTTCAGTTGCAGAATAACCGACTCACTGGAGAGATTCCTGACCAAATTGGCAACCTATTGAGCCTGAGAGTTTTAAACATGAGCTCTAACATGTTTGAAGGAAAGCTTCCTTCAAACATCTCCCACTTGAATGACCTCCAGCTTCTTGATTTATCATCAAACAGGATTCTCAGCATGATTCCTGATGACATCAGCACCTTGAAAAAGCTTGAGGTTTTAAAACTGGGAAGGAACAGTCTCTATGGTGCAATTCCTGCATCTCTAGGAAACATTTCTTCTCTCAAAAATATCAGCTTTGGCACCAACTCTCTCACTGGTTGGATCCCCAGTGACTTGGGTAGGCTCCATGACTTGATTGAGCTTGATCTTACTCTCAACAATCTCACTGGGACTGTTCCACCTTCTATATACAACTTATCTTCCCTTGTCAACTTGGCCTTAGCTGCAAACTCTTTGTGGGGTCAGATTCCTCAGGATGTTGGTCACAAGCTTCCTAAACTCCTGGTGTTCAATTTCTGCTTCAATAAATTCACAGGTAGAATTCCAGGGTCATTGCACAACCTCACCAACATTCGGGTCATTCGCATGGCATCCAACCATTTGGAAGGAACAGTGCCACCTGGTTTGGGAAATCTCCCATTTCTTCGCATGTATAATATTGGCTATAACAGGATAGTGAGTTCAGGTGTGAGAGGTCTAGACTTCATTACTTCTTTGACAAACAGCACTCTCCTGAACTTTCTGGCAATTGATGGCAATATGCTTGAAGGTGTAATTCCAGAAACCATTGGCAATCTTTCCAAGGATCTCTCAATATTATTCATGGGAGGGAATCGTTTCAATGGAAGCATACCCTCCTCCATTGGTCATCTAAGTGGCTTGAAGTTGTTAAACTTGAGCTACAATTCAATCTCTGGAGAAATCCCACCAGAGTTAAGCCAGTTAGAGAAACTACAAGAGCTATCTGTGGCTGGAAATGAGATATCAGGTGGTATACCAAACTCCCTTGGTAATCTCCTGAATTTAAACCAGATTGATTTGTCAAGAAACAAACTTGTGGGGACAATACCTACCAGTTTTGGGAAGTTGCAAAACCTGCTTTACATGGACTTATCAAGCAACAAACTCAATGGCAGCATACCTGTGGAAATCCTCAATCTCCCAACTTTGAGCAAGGTTTTGAACTTGTCTATGAACTTTTTGAGTGGACCAATACCTCAAGTTGGGAGAATGATTAGTGTTGCCACCATTGACTTTTCTAGCAATCAATTGTACGGTGGCATCCCCAGCTCATTCAGCAATTGTCTCAGCTTAGAAAAAATGTTATTGGCCCGGAATCAGCTTTCAGGTCCCATTCCAAAGGCTCTTGGAGATGTTAAAGGCTTGGAAACTCTGGACCTGTCCTCCAACCAACTCTCTGGAACCATTCCTATTGAACTTCAAAATCTACATGTCCTTAAGCTCATAAACCTCTCGTACAATGATTTAGAAGGAGCCATTCCTAGTGGTGGAATTTTCCAAAATGTCTCTGCTGTCCATTTAGAAGGCAATAGAAAACTCTGCTTGCGTGTCCCATGCATGCCTCATGGCCATGGAAGAAATGTAAGACTTTACATCATCGTAGCCATCGTGGTAACATTAATACTGTGTCTCACAATTGGCCTACTACTGTATATAAAGAACAAAAGGGTGAAGGTAACAGCGGCAGCAGCCGTATCTGAACAGCTGAAACCTCAAGCACCAATGATCTCTTATGATGAGCTCCGTGTGGCGACCGAGGAGTTCAGCCAGGAAAACTTAATAGGAGTTGGTAGCTTTGGCTCAGTTTATAAAGGCCATCTAAGTCATGGAACTACTGTTGCAGTGAAAGTTCTTGACACCCTAAGAACTGGCTCTTTAAAGAGTTTCTTTGCAGAATGTGAGACCATGAAGAACTCAAGGCATAGAAATCTGGTTAAGCTGATCACATCATGCTCTAGTGTTGACTTCAAAAACAATGATTTTCTGGCTCTGGTGTATGAGTACCTGTGTAATGGTAGCTTGGAAGATTGGATTAAGGGGAGGAGGAAGCATGCAAACGGCAATGGGTTGAACCTTATGGAGAGACTGAACATAGCTATTGATGTTGCTTGTGCATTGGATTACCTGCACAATGATAGTGAAATCCCAGTTGTGCACTGTGATTTGAAGCCTACCAACATTCTATTGGGTGAGGACATGACAGCAAAAGTTGGAGACTTTGGATTAGCTAGGTTGCTGATTCAAAGATCAACTAATCAAGTTTCCATAAGCTCCACTCATGTCCTTAGGGGCTCAATCGGTTACATACCTCCAGAATATGGATGGGGAGAGAAAGCATCTGCAGCTGGTGATGTATATAGTTTTGGTATAGTGTTACTAGAGCTCTTCTCTGGGAAAAGCCCAACAGATGAGTCCTTCACAGGAGGCCTAAGCATTAGAAAATGGGTGCAATCAGGATTGAAGGACAAGACAGTGCAAGTGATTGACCCTCAGTTGCTGTCCCTCATTTTCCATGGTGACCCTTCTGAGGGACCAAATTTACAATTCTACTTTGTGGATGCAATTGTAGGAGTTGCCATATCTTGCACTGCAGGGAATCCAGGTGAACGCATTGACATTAGAGATGCTGTTCGCCAACTAAAAGCTGCCAGAGACTCTCTTTTGAAACAGTCTTATGAGGCTCCTACTGGAGATACCAAGCGTTACGTCCACGTTTCAGGAAAGTGA 3072 0.4313 MALSSQILVHYALLLILLPLQLHNLLVGVSSATLSITTDAEALISFKSQLSNETLNTLSSWNHNSSPCNWTGVLCDRLGQRVTGLDLSGLGLSGHLSPYIGNLSSLQTLQLQNNRLTGEIPDQIGNLLSLRVLNMSSNMFEGKLPSNISHLNDLQLLDLSSNRILSMIPDDISTLKKLEVLKLGRNSLYGAIPASLGNISSLKNISFGTNSLTGWIPSDLGRLHDLIELDLTLNNLTGTVPPSIYNLSSLVNLALAANSLWGQIPQDVGHKLPKLLVFNFCFNKFTGRIPGSLHNLTNIRVIRMASNHLEGTVPPGLGNLPFLRMYNIGYNRIVSSGVRGLDFITSLTNSTLLNFLAIDGNMLEGVIPETIGNLSKDLSILFMGGNRFNGSIPSSIGHLSGLKLLNLSYNSISGEIPPELSQLEKLQELSVAGNEISGGIPNSLGNLLNLNQIDLSRNKLVGTIPTSFGKLQNLLYMDLSSNKLNGSIPVEILNLPTLSKVLNLSMNFLSGPIPQVGRMISVATIDFSSNQLYGGIPSSFSNCLSLEKMLLARNQLSGPIPKALGDVKGLETLDLSSNQLSGTIPIELQNLHVLKLINLSYNDLEGAIPSGGIFQNVSAVHLEGNRKLCLRVPCMPHGHGRNVRLYIIVAIVVTLILCLTIGLLLYIKNKRVKVTAAAAVSEQLKPQAPMISYDELRVATEEFSQENLIGVGSFGSVYKGHLSHGTTVAVKVLDTLRTGSLKSFFAECETMKNSRHRNLVKLITSCSSVDFKNNDFLALVYEYLCNGSLEDWIKGRRKHANGNGLNLMERLNIAIDVACALDYLHNDSEIPVVHCDLKPTNILLGEDMTAKVGDFGLARLLIQRSTNQVSISSTHVLRGSIGYIPPEYGWGEKASAAGDVYSFGIVLLELFSGKSPTDESFTGGLSIRKWVQSGLKDKTVQVIDPQLLSLIFHGDPSEGPNLQFYFVDAIVGVAISCTAGNPGERIDIRDAVRQLKAARDSLLKQSYEAPTGDTKRYVHVSGK 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02047 1023 ProSitePatterns Protein kinases ATP-binding region signature. 709 731 IPR017441 GO:0005524
Cca09g02047 1023 SMART LRR_typ_2 151 175 IPR003591 -
Cca09g02047 1023 SMART LRR_typ_2 103 127 IPR003591 -
Cca09g02047 1023 SMART LRR_typ_2 591 616 IPR003591 -
Cca09g02047 1023 SMART LRR_typ_2 296 320 IPR003591 -
Cca09g02047 1023 SMART LRR_typ_2 399 423 IPR003591 -
Cca09g02047 1023 SMART LRR_typ_2 447 470 IPR003591 -
Cca09g02047 1023 SMART LRR_typ_2 567 590 IPR003591 -
Cca09g02047 1023 SMART LRR_typ_2 471 495 IPR003591 -
Cca09g02047 1023 SMART LRR_typ_2 223 247 IPR003591 -
Cca09g02047 1023 SMART serkin_6 703 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02047 1023 Pfam Protein kinase domain 704 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02047 1023 CDD STKc_IRAK 709 996 - -
Cca09g02047 1023 SUPERFAMILY Protein kinase-like (PK-like) 685 995 IPR011009 -
Cca09g02047 1023 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 25 1002 - -
Cca09g02047 1023 Gene3D Ribonuclease Inhibitor 340 636 IPR032675 -
Cca09g02047 1023 Gene3D Ribonuclease Inhibitor 34 237 IPR032675 -
Cca09g02047 1023 SUPERFAMILY L domain-like 37 333 - -
Cca09g02047 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Cca09g02047 1023 SUPERFAMILY L domain-like 378 629 - -
Cca09g02047 1023 PANTHER OS04G0122200 PROTEIN 25 1002 - -
Cca09g02047 1023 Gene3D Transferase(Phosphotransferase) domain 1 784 1016 - -
Cca09g02047 1023 ProSiteProfiles Protein kinase domain profile. 703 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02047 1023 Pfam Leucine rich repeat 449 507 IPR001611 GO:0005515
Cca09g02047 1023 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Cca09g02047 1023 Pfam Leucine rich repeat 545 604 IPR001611 GO:0005515
Cca09g02047 1023 Pfam Leucine rich repeat 378 436 IPR001611 GO:0005515
Cca09g02047 1023 Gene3D Phosphorylase Kinase; domain 1 674 783 - -
Cca09g02047 1023 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Cca09g02047 1023 Gene3D Ribonuclease Inhibitor 238 339 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02047 Cca-Chr9 45546293 45549705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02047 38 1006 Receptor kinase-like Gene Family AT3G47570 40.946 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Cca09g02047 Pkinase 5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02047 - - gmx:100783512 1702.57