Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02044 ATGGATTTTTTCATGCAAACTTTGTTTCTTACTTTGATCACCTTGGTTGCATCCATCTATGTTTGGCAGAAAAGAAAAACATTAGGTGGCACTAAAACCTTGCCCCCAGGTACTTTTGGGTGGCCCCTAGTGGGTGAAACCTTCCAATTTTTGTTCAACAAAGTTGATGATTTCCTTCAAGAGAGGGCTAAAAAGTACTCCTCAGAGATCTTCTGCACCAACATTCTAGGAGAGCCAACAGTGGTTCTTTGTGGCCCTGGTGCCAACAAATTTGTCTCCACCAATGAGACAAAGCTTGTCAAAGTTTGGTACATGAAGACTCAACGCAGGTTCTTCAATATCCCTGATCACACTCATGCAGCTAAGCCAAAACAACAAGGTGCTTCTGCTGCTCCAGTGGCGATCTTGGGGATTCTGAAACCTGAAGGGATGTCTAGTTACATGGGGAACAAGATTGGATCAATCATGCACCAACATTTCTTGACACACTGGGAAGGGAAAACAGAAGTGGAGGTGTACCCTTTGGTCAAGGACTTTTCCTTTAGACTTGTGTGTCAATTCTACTTGGGCCTTGATGAGCCCAAATTGGCCACTGAGTTTGAGAACTTGTATTTTGGGATCTACTCTGTTCCTTTGAATTTCCCGGGCTCTAAATATAGTAGGGCACTGAGGGCTGCAGCTGCAATAAGGAAAGAAATCCAATTTCTGATCAAAGAGAAGATTGATGCTTTGAACAAGGGGCAAGTTGTGGATGGCCTACTAGGACATGTAGTTGGAGCTGAGCAAGGTGGAAATTATGTGCCAAGACTTGAAATAAGCAACATCATCATGGGGTTGATGAATTCCAGTCACTTGCCAATAGCTATTACTCTTGCTTTCATGATCAAACACATTGGACAGAGGCCTGATATCTACCAAAAAATCATATCCGAACATGCTGATATTACAAAATCCAAAGGATCTGGTACAGCACTAGATTGGGATAGCATACAGAAATTGAAATACACATGGGCTGTTGCACAGGAGACCATGAGACTCTACCCTACTGCACCGGGTGCATTCAGAGAAGCTTTAACAGATATCACCTATGAAGGATTTACTATTCCAAAGGGATGGAAGATCTATTGGTCCCTTATTGGAATAAATAAGAACCCCAAGTACTTTCCTGAACCTGAAAGTTTTGATCCCTCAAGGTTTGAAGGGAATGTTCATGCTCCCTACACTTGGATACCCTTTGGAGCTGGACCAAGATCATGCCCTGGAAGGGACTATACACGGTTTGTGCTCATCAATTTCATTCACATTCTCATAACCAAGTTCAAGTGGGAAGCTATATTTTCTCATGAGAAAGTTTCAGGTTCTTTGGTACCTATCCCAGCAGAGGGAATTCCTATCCGTCTTCACCACCTTTAA 1413 0.4282 MDFFMQTLFLTLITLVASIYVWQKRKTLGGTKTLPPGTFGWPLVGETFQFLFNKVDDFLQERAKKYSSEIFCTNILGEPTVVLCGPGANKFVSTNETKLVKVWYMKTQRRFFNIPDHTHAAKPKQQGASAAPVAILGILKPEGMSSYMGNKIGSIMHQHFLTHWEGKTEVEVYPLVKDFSFRLVCQFYLGLDEPKLATEFENLYFGIYSVPLNFPGSKYSRALRAAAAIRKEIQFLIKEKIDALNKGQVVDGLLGHVVGAEQGGNYVPRLEISNIIMGLMNSSHLPIAITLAFMIKHIGQRPDIYQKIISEHADITKSKGSGTALDWDSIQKLKYTWAVAQETMRLYPTAPGAFREALTDITYEGFTIPKGWKIYWSLIGINKNPKYFPEPESFDPSRFEGNVHAPYTWIPFGAGPRSCPGRDYTRFVLINFIHILITKFKWEAIFSHEKVSGSLVPIPAEGIPIRLHHL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02044 470 Pfam Cytochrome P450 35 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02044 470 Gene3D Cytochrome P450 25 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02044 470 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 12 468 - -
Cca09g02044 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Cca09g02044 470 PRINTS P450 superfamily signature 300 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02044 470 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02044 470 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02044 470 PANTHER CYTOCHROME P450 26 12 468 - -
Cca09g02044 470 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02044 470 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02044 470 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02044 470 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02044 470 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02044 470 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02044 470 SUPERFAMILY Cytochrome P450 33 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02044 Cca-Chr9 45520521 45522715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02044 33 374 Cytochrome P450 AT5G36110 31.549 3.38e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02044 K20667 - gmx:100782971 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02044 09 45520521 45522715 Cca09g02044 09 45520521 45522715 ECH