Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02038 ATGAGCATGGGAAGAGGCAGTGCAATTGTAGCTCTTACACTATCATTTTGGTTGCTAATTCACTTTGAGATGGCTCATTCAGCCACCTACACAGTTGGAGGTGCAAATGGTTGGACCTTCAACACGGTGGGTTGGCCCAAAGGGAAGCGATTTAGGGCTGGTGATACACTTGTTTTTAACTACAGCCCTGGGGCTCACAATGTGGTGGCTGTGAATAAAGGTGGTTACAATGCATGCAAGACACCAAAAGGTGCCAAAATCTATAAATCAGGGAGTGATCAGATCAAACTTGTGAAGGGACAGAACTACTTCATCTGCAATTTCGTTGGTCACTGCCAATCTGGAACCAAAATTGCCATTAATGCTGTCTGA 372 0.4489 MSMGRGSAIVALTLSFWLLIHFEMAHSATYTVGGANGWTFNTVGWPKGKRFRAGDTLVFNYSPGAHNVVAVNKGGYNACKTPKGAKIYKSGSDQIKLVKGQNYFICNFVGHCQSGTKIAINAV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02038 123 Gene3D - 28 123 IPR008972 -
Cca09g02038 123 CDD Plantacyanin 28 122 IPR041844 -
Cca09g02038 123 PANTHER BASIC BLUE-LIKE PROTEIN 9 121 - -
Cca09g02038 123 ProSiteProfiles Phytocyanin domain profile. 28 123 IPR003245 GO:0009055
Cca09g02038 123 Pfam Plastocyanin-like domain 38 115 IPR003245 GO:0009055
Cca09g02038 123 PANTHER BLUE COPPER PROTEIN 9 121 IPR039391 GO:0009055
Cca09g02038 123 SUPERFAMILY Cupredoxins 28 122 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02038 Cca-Chr9 45448098 45449488 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02038 8 123 Phytocyanin Superfamily AT1G17800 40.000 4.80e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02038 - - gmx:100499869 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02038 09 45448098 45449488 Cca09g02038 09 45448098 45449488 ECH