Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca09g02031 | ATGTCATCCTTCacctacgacgtgttcctcagcttcagaggctccgatacacgctacgctttcaccggcaacctctacaaagctcttcgtgacagaggaatccacaccttcatcgacgaagaggaccttcaacgagggcacgaaatcaaaccatcgctcatcaatgctattcaacactccaggatggccatccttgtcctctcccaaaactatgcgtcttcctcccactgcttggacgaacttgtcacaatcattgactctgttaaggccaagggtcgcttcattctgcccattttttatgacgttgatccttctcacgtgcgccatcagaccgggacttatggggaggcactcgccatgcaccaggaaaggttcacacgtgacaaggagaaccggaaggataacgtggacaggttgcacaaatggaagatggctcttaaccaagcagctagtttgtccggcAACCATTACAAACTTGGGAATGAATATGAACATGagtttattgggaagatagttaaagaggtctctgacaagattaaccgcacgccattacatgtggcggattaccccgttggactggattctcgagtgcaaaaagtgaagtcgcttttggaatttggatctgatattggagtccatgctgtagggatttatggaatagggggaatgggcaaaacaacacttgctcgagcaatttataattcaattgcggaccaatttgaaggtttatgttttcttgacaatgtgagagaaaacacaattaaacacggattagtacatctccaagagatgcttctgtctgaagtagttggagacaaggatattaagataggaagtgttagtagaggaatttcaataataaagcataggctccagcgaaagaaggtttttataattcttgatgatgtcgacaagctagaacaattgcgagcaactgttggagggcctaattggtttggttctggcagtagagtcatcataactactcgggacaaacatttgttagcaagttatggggttgatagaatatatgaggtgcgcggtctagatgaggaagaagcacttgaattgcttagttggaacgcttttaaagatgacaaagttgatccaagatacaaggacatttctaaccaagcagtagcttatgcttctggccttccactggctttggaagtagtaggttccctcttgtttgggaaaagcgtaaaagaatgggaatctgcattagatcagtataaaaaaattcctcacaagagtatccaagatatactcaaagtaagctacaatgctttagaggaagatcagaagaaaatttttcttgacattgcttgttgtttgaaaggacctgaagtggcagaggttgaagaaatactttgtgctcattatggtgtttgcatgaaatatggcattggagtgttggttgataaatccctcataaaaattaagaatggctgtgtgacacttcatgaattgatagaggttatgggtaaagaaattgatcgaaaagaatcaccgaaagagcttgggaaacgcaagaggttgtggttccatgaagatataattcaagttttagcagaaaatataGGGACTAGTGTGGTTGAAATCATATGCCTGGATTTCCCTTTATTTGAAGGAGATGAAATGTTCATAGAATGGAATGGAGAGGCCTTCAAGAAGATGGAAAACCTCAAAACATTAATTATTAGAAACTGTCATTTTTCAAAAGGCCCCAAACATCTTCCAAACAGTTTAAGAGTATTGGAATGGTGGGCATATCCATTACAGGATTTGCCAACTGATTTTTATCCAAACAAACTTGCCATATGCAAATTACCCAAGAGTTGCTTTACATCACTTGAGTTAGTTAGCTTATCGAAGAAGTTCTTGAATCTGATAGTTTTAAATTTTGACGAGACCGAATGTTTAACACAAATACCTGACATATCCGGTCTCCGGAATTTAGTAAAATTGTCATTTGAATGTTGTGAGAATTTAGTTTCAATTCATGATTCGGTTGGATTTCTTGATAAGCTTAGAATCTTGAGTGCTTTTGGTTGCAGCAAGCTTACAAGTTTTCCGCCCATCAAGTTGACCTCTCTTGAACAACTTGAACTTTCATCTTGCTCAAGTCTTGAAAGTTTTCCAGAGATATTGGGAAGGATGGAAAACATAACACAGCTTGAGTTGAAGTACACTCCTATAAAGGAATTCCCATTTTCATTTAGAAATCTTACTGGACTTCGAGATTTAGTGCTGGTTGGCTGTGGAAATGTTCAGTTACCAAGTAGCATTGTCATGTTGCCAGAACTGGCTGAGATTTTCGCTTTGGAATGCAAAGGGTGGATATTGCCAAAAGAAGATAAAGAAAAAGTGAGCTCAATATATTCAAATGTAAAATGTCTCTGTCTCACAGGCTGCAATCTATCAGATGAATATTTTCCCATGGCTTTAGCATTGTTTGGTAATGTGAAAGAGTTAGAGCTATCCAGCAATAACTTCACATTTCTTCCTGAATGCATCAAAGAATGTCGCTCTTTAACATTACTTAATTTGGATAATTGTGAGCGTCTTCGAGAAATTAGAGGGATTCCACCAAATTTAGAACATTTCTCAGGGGCAAATTGCAAGTCCTTGAGTTTCTGGTGTACTGCCATGTTGTTGAATCAGGAACTGCATGAGGCTGGAAACACCATGTTTTGTTTTCCTGGATCAAGGATTCCAGATTGGTTCGAGCACCAAAGCATAGGACCCTCAATATCTTTCTGGTTCCGTGACAAGTTCCCTACCATGGCTCTTTGTTTTGTTATTGGACCAATGGGTAAGGACTCTATTTTGTTTAGACCCATCATGACCATAAATGGGGTGGAGATACAATTCTTGACTGAAAAAAGAATTTGTTTCGACTTCCCATCTTTAACTGATCACGTATTTATCATTGGTACAAAATACACGAGCTTCGGAGATAATCTGGATGAAGTACTTTCGAAAAATGAATGGAATCATGTGGTTGTTTCCATTGGTATTGGTTTTGAACCAACCCCTGAGAAGATGATGATTGTCAAGCGAACTGGATTCCACATAATCAAACCAGAAAGCAGCACGGGCGATATTGAATTCACCGATCCTTATAATAACCATCCAATTCCAAGCTTGGAAGAGAAGCATAAATTGTTGGACATAGGAGATTGTCATAAACAATTTATACAGCAGCAAACCACTTTGGTTTCATTGGAACCACATGTGGGACAGGGCAGGGAGTCATTTTCATTACTTCATCCTCAAGCATGCCAAAATAATGTGATTTCGGATTCGAATTCAACACGAATAAGTAGCATCGCCGGTATCCAAGGGCATGAAATTGCAGCAGGAAATTTACAGTTGGACATGGGAGTTTTGCAATTTGTGCAGAAGCGAAAAAGATTGGCTATTATGGGTTTATTGCAACAACGGCGCATGGCTTCATTGGGTTTACTGCAACGACGGGGCAGAGAATGTCTTTCATTGCTTTGTCCTCCATCATTGGATTACATGAACGATAATCTGTATTGGGATTCAAAGTCGCAGAGGAATAGCATCGTTAGTGTCCAAGGCAGGACACACACACACCAACACCAACCTGAACCTGAACCTGTGTCCATCTCGATTACAGCATGGGCTTCCCACTAA | 3666 | 0.2278 | MSSFTYDVFLSFRGSDTRYAFTGNLYKALRDRGIHTFIDEEDLQRGHEIKPSLINAIQHSRMAILVLSQNYASSSHCLDELVTIIDSVKAKGRFILPIFYDVDPSHVRHQTGTYGEALAMHQERFTRDKENRKDNVDRLHKWKMALNQAASLSGNHYKLGNEYEHEFIGKIVKEVSDKINRTPLHVADYPVGLDSRVQKVKSLLEFGSDIGVHAVGIYGIGGMGKTTLARAIYNSIADQFEGLCFLDNVRENTIKHGLVHLQEMLLSEVVGDKDIKIGSVSRGISIIKHRLQRKKVFIILDDVDKLEQLRATVGGPNWFGSGSRVIITTRDKHLLASYGVDRIYEVRGLDEEEALELLSWNAFKDDKVDPRYKDISNQAVAYASGLPLALEVVGSLLFGKSVKEWESALDQYKKIPHKSIQDILKVSYNALEEDQKKIFLDIACCLKGPEVAEVEEILCAHYGVCMKYGIGVLVDKSLIKIKNGCVTLHELIEVMGKEIDRKESPKELGKRKRLWFHEDIIQVLAENIGTSVVEIICLDFPLFEGDEMFIEWNGEAFKKMENLKTLIIRNCHFSKGPKHLPNSLRVLEWWAYPLQDLPTDFYPNKLAICKLPKSCFTSLELVSLSKKFLNLIVLNFDETECLTQIPDISGLRNLVKLSFECCENLVSIHDSVGFLDKLRILSAFGCSKLTSFPPIKLTSLEQLELSSCSSLESFPEILGRMENITQLELKYTPIKEFPFSFRNLTGLRDLVLVGCGNVQLPSSIVMLPELAEIFALECKGWILPKEDKEKVSSIYSNVKCLCLTGCNLSDEYFPMALALFGNVKELELSSNNFTFLPECIKECRSLTLLNLDNCERLREIRGIPPNLEHFSGANCKSLSFWCTAMLLNQELHEAGNTMFCFPGSRIPDWFEHQSIGPSISFWFRDKFPTMALCFVIGPMGKDSILFRPIMTINGVEIQFLTEKRICFDFPSLTDHVFIIGTKYTSFGDNLDEVLSKNEWNHVVVSIGIGFEPTPEKMMIVKRTGFHIIKPESSTGDIEFTDPYNNHPIPSLEEKHKLLDIGDCHKQFIQQQTTLVSLEPHVGQGRESFSLLHPQACQNNVISDSNSTRISSIAGIQGHEIAAGNLQLDMGVLQFVQKRKRLAIMGLLQQRRMASLGLLQRRGRECLSLLCPPSLDYMNDNLYWDSKSQRNSIVSVQGRTHTHQHQPEPEPVSISITAWASH | 1221 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca09g02031 | 1221 | Gene3D | Ribonuclease Inhibitor | 546 | 695 | IPR032675 | - | |
| Cca09g02031 | 1221 | Pfam | C-JID domain | 901 | 1028 | IPR045344 | - | |
| Cca09g02031 | 1221 | SUPERFAMILY | "Winged helix" DNA-binding domain | 419 | 524 | IPR036390 | - | |
| Cca09g02031 | 1221 | Gene3D | - | 178 | 341 | IPR027417 | - | |
| Cca09g02031 | 1221 | CDD | AAA | 191 | 306 | - | - | |
| Cca09g02031 | 1221 | PANTHER | ARCHAEAL ATPASE | 17 | 1006 | - | - | |
| Cca09g02031 | 1221 | SUPERFAMILY | L domain-like | 546 | 900 | - | - | |
| Cca09g02031 | 1221 | Gene3D | - | 348 | 432 | IPR042197 | - | |
| Cca09g02031 | 1221 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 177 | 442 | IPR027417 | - | |
| Cca09g02031 | 1221 | SMART | till_3 | 5 | 152 | IPR000157 | GO:0007165 |
Showing 1 to 10 of 23 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca09g02031 | - | - | gmx:100814962 | 1906.34 |
Showing 1 to 1 of 1 entries