Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02022 ATGGAGAAGTACGAGGTAGTGGAGGAAGACATAGGACTTGGGAGATACGCAGTGGTGAAGCGTATGCGTCACAAAAACACCAGACACCTCGTTGCCGTCAAACACATCCCACGGGGCCCCGAGATTGATGAGAAGGTGGCAAGGGAAATCATAAACCATAGATCTCTTCACCATCCGAATATTGTTCGGTTCAAGGAGGTGGCTTTGACTCCAACACATCTTGCAATAGTTATGGAGTACGCAGCAGGTGGAGAGCTGTTTAATCGAGTTTGCAGAGGACCAATAAGTGAAGACGAGGCTCGATATTTCTTCCAGCAGTTGATTTCAGGAGTTAGTTATTGTCATAAAATGGAAATATGTCATCGAGACTTGAAGCTGGAGAATACCTTATTAGATGGAAGCCCTGCTAATCGTCTCAAAATTTGTGATTTCGGCTATTCTAAGTCATATCTACTCCATTCAAGGCCTCATTCAATGATAGGAACTCCAGCCTATATTGCACCAGAGGTCATTTCTGGCAAAGCTTACGATGGAAAGTTGGTAGATTTATGGTCCTGTGGAGTAATACTTTATACAATGCTGGTAGGAACGTTGCCATTTGAGGACAAAGATGATCACCGGAATCTCAAGAAAACCGTACAAAGAGTTATGGCTGTTCAATACCAGATCCCTGACAAAGCTGGCTTATCTCTAGACTGTAAAAATCTGATATCTCGCATTTTTGTGGCAAATCCAGCAATGAGAATCACCATGAAGGAAATTAAGTCACATCCATGGTTTTTGAAGAACTTGCCAAAGGAATTGAGAGAAGAGGCTCAAGATGTTTACTACAGTGAAGAAAATGCAAAATCTTCTCTTCAAAGCATAGAAGAGATCATGAACATTGTCAACGAGGCAAAAACTACACCTGCAGCTTCCAGTGATCTGATTCTATGA 936 0.422 MEKYEVVEEDIGLGRYAVVKRMRHKNTRHLVAVKHIPRGPEIDEKVAREIINHRSLHHPNIVRFKEVALTPTHLAIVMEYAAGGELFNRVCRGPISEDEARYFFQQLISGVSYCHKMEICHRDLKLENTLLDGSPANRLKICDFGYSKSYLLHSRPHSMIGTPAYIAPEVISGKAYDGKLVDLWSCGVILYTMLVGTLPFEDKDDHRNLKKTVQRVMAVQYQIPDKAGLSLDCKNLISRIFVANPAMRITMKEIKSHPWFLKNLPKELREEAQDVYYSEENAKSSLQSIEEIMNIVNEAKTTPAASSDLIL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02022 311 SUPERFAMILY Protein kinase-like (PK-like) 7 287 IPR011009 -
Cca09g02022 311 SMART serkin_6 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02022 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Cca09g02022 311 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Cca09g02022 311 PANTHER SERINE/THREONINE KINASE 2 307 - -
Cca09g02022 311 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Cca09g02022 311 Pfam Protein kinase domain 7 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02022 311 ProSiteProfiles Protein kinase domain profile. 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g02022 311 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Cca09g02022 311 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02022 Cca-Chr9 45306019 45320190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02022 11 292 CBL-interacting serine-threonine protein kinases AT2G30360 38.014 3.22e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Cca09g02022 Pkinase 8.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02022 K14498 - gmx:100787825 504.597