Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02001 ATGGAGGTGACCAACCTTGTTGTCTTGCCAGCAGTTTTGGCATTCTGTCTCCTTTGCCTACATTTCATCAATAAAATTAGACTCAGAAAGCATCCAAACCCGCATCTTCCTCCTGGAAGATTTGGGTGGCCTATTGTTGGAGAAACCTTTGAGTTTATGCGTTCATGTCTTGAAGGAAACAGTTCAAGGTTCATACAAGAGAGAATGGAGAAATATGACTCAAGGGTGTTCAAGACTTTGTTGTTTGGAAATCCTATGGCTGTGTTTTGCGGGCCAGCAGGGAACAAGTTCCTATTCAGCAATGAGAACAAGAATGTCCAAGTGTGGTGGCCTAGTTCTGTAAAGAAGCTGTTAAGGTTGTCCCTTGTTAACAAGGTTGGTGACGAGGCTAAGGTGGTCAGAAAGTTGCTCATGAGCTTTCTTAATGCAGAAACACTCAGAAATTACTTGCCAAAAATGGATACCATTGCTCAGCGCCATATAGACACATATTGGAAAGGAAAGGAGCAGGTGTTTGTCTATCGCATAGTAAATCTATACACGTTTGAATTGGCTTGTTGCTTATTTTTAAGCATGGAAGACTCTGACCACTTATCAAAGCTTTCATTAAAATTTGATGAATTTCTAAAAGGGATGATTGGCTTCCCCCTCAACATTCCTGGAACAAAGTTTCATCGTTCAATGAAAGCTGCAGATGCAATAAGAAAAGAAATTAAAATGATTCTAAAGAAAAGGAAAGTGGATTTGGAGGAGAAGAGGGCATCACCTACTCAAGACCTTCTATCACACATGCTTGTTACATCTGACACCAATGGAAGGTTTATGACAGAAATGGAAATTATTGATAATATACTTCTTCTTCTTTTCGCTGGCCACGATACTTCTAGATCAGTGTTATCATTGGTTATGAAGTATCTTGGACAGTTGCCTCAGGTTTATGAACATGTGTTGAAAGAGGCAGGGAAGTTGTTGCAATGGGAAGATGTTCAGAAAATGAAATACTCTTGGAATGTTGTATCTGAAGGTATGAGGCTATCCCCGCCAGTGAGTGGTGCTTACAGAGAAGCTATAAAGGATTTCCCCTATGCTGATTATAACATCCCTAAAGGGTGGAAGTTGCATTGGAGCACTAGTTCATCACACAAGGATCCAACACTGTTCTTGAATCCCGAAACTTTTGATGCTTCAAGATTTGAAGGGGAAGGACCTACACCCTTTTCATATGTTCCATTTGGAGGTGGCCCCCGAATGTGTTTGGGGCAAGAGTTTGCTAGACTAGAGATCCTTCTGTTTATGCATCATATCGTGAAACGGTTCAAGTGGGATTTGGTGATTCCTGGGGAGAAGTTCAAGTATGATCCCTTGCTAGAACCAGAAAAAGGACTTGCAATTCGACTTCATCCTTCCCATTGA 1413 0.4112 MEVTNLVVLPAVLAFCLLCLHFINKIRLRKHPNPHLPPGRFGWPIVGETFEFMRSCLEGNSSRFIQERMEKYDSRVFKTLLFGNPMAVFCGPAGNKFLFSNENKNVQVWWPSSVKKLLRLSLVNKVGDEAKVVRKLLMSFLNAETLRNYLPKMDTIAQRHIDTYWKGKEQVFVYRIVNLYTFELACCLFLSMEDSDHLSKLSLKFDEFLKGMIGFPLNIPGTKFHRSMKAADAIRKEIKMILKKRKVDLEEKRASPTQDLLSHMLVTSDTNGRFMTEMEIIDNILLLLFAGHDTSRSVLSLVMKYLGQLPQVYEHVLKEAGKLLQWEDVQKMKYSWNVVSEGMRLSPPVSGAYREAIKDFPYADYNIPKGWKLHWSTSSSHKDPTLFLNPETFDASRFEGEGPTPFSYVPFGGGPRMCLGQEFARLEILLFMHHIVKRFKWDLVIPGEKFKYDPLLEPEKGLAIRLHPSH 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02001 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Cca09g02001 470 SUPERFAMILY Cytochrome P450 31 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02001 470 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 15 459 - -
Cca09g02001 470 Gene3D Cytochrome P450 27 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02001 470 Pfam Cytochrome P450 37 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02001 470 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02001 470 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02001 470 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02001 470 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02001 470 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02001 470 PANTHER CYTOCHROME P450 26 15 459 - -
Cca09g02001 470 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02001 470 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02001 470 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g02001 470 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02001 Cca-Chr9 45036330 45040168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02001 29 373 Cytochrome P450 AT5G36110 42.105 1.46e-99 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02001 - - gmx:100808690 833.943