Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca09g01992 | ATGAGTGATAAGGAATTTGGGAGGCCTCTCTCAGGTAAAAGAAGATTGAAGGATTTATTGCTTCAAAAAGATAATCAGTTTTGTGCTGATTGTAACGCTCCAGATCCTAAATGGGCGTCGGCCAATATTGGAGTTTTTCTGTGCTTAAAATGCTGTGGTGTGCACAGAAGTCTTGGCTCTCATATATCCAAGGTTTTGTCTGTGACATTGGATGAATGGTCAGATGAGGAACTAGATGCAATGATGGAAGTTGGAGGAAATTCTTCTGCTAATTCAATTTATGAGGCTTATCTTCCACAAGGATTTACAAAACCTGGACCAGATGCCAGTCATGAGCAGCGTACAAAATTCATCCGATCAAAGTATGAGCGTCAAGAATTTTTGAAATCTAGTTTGCGCATTGTGTCGGGAACAGGCAATAATGTTCGATCAAATGTTTCCCAAGTAGGGACTGTGAATAGTTTACGAAGTACTAGTGATTCACAGAACACGGAAGGAAAGCTTGGAACGTTGAAGGTGAAAGTGATCAAAGGCACGGATTTAGCTATCAGAGATATGTTGACAAGTGATCCATATGTTATCTTGAAACTTGGCCAACAGACTGTTCAGACAACTGTGGTGAAGAGTAATTTGAATCCAGTCTGGAATGAGGAACTTATGCTGTCTGTTCCTCGGCAATTTGGACTATTGAATTTGAATGTATTTGATTATGACATGTTTTCAGCTGATGATATAATGGGGGAAGCAGATATTGATCTTCAGCCTCTGATTTCATCTGCAATTTCATTTGGAGATGCTAGTATGTTTGATGATATGCAGATAGGAAAATGGCTGAAATCCCATAACAATGCGCTTATAGATGATAGCATAGTCAATATTGTTGATGGTAAGATTAAACAAGAGATGACCATCAAGCTCCAGAACGTCGAATCTGGAGAATTAGACTTAGAACTCGAGTGGCTACCTCTTGCTAAATAG | 978 | 0.3937 | MSDKEFGRPLSGKRRLKDLLLQKDNQFCADCNAPDPKWASANIGVFLCLKCCGVHRSLGSHISKVLSVTLDEWSDEELDAMMEVGGNSSANSIYEAYLPQGFTKPGPDASHEQRTKFIRSKYERQEFLKSSLRIVSGTGNNVRSNVSQVGTVNSLRSTSDSQNTEGKLGTLKVKVIKGTDLAIRDMLTSDPYVILKLGQQTVQTTVVKSNLNPVWNEELMLSVPRQFGLLNLNVFDYDMFSADDIMGEADIDLQPLISSAISFGDASMFDDMQIGKWLKSHNNALIDDSIVNIVDGKIKQEMTIKLQNVESGELDLELEWLPLAK | 325 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca09g01992 | 325 | Gene3D | Arf GTPase activating protein | 6 | 134 | IPR038508 | - | |
Cca09g01992 | 325 | CDD | ArfGap | 16 | 122 | - | - | |
Cca09g01992 | 325 | Pfam | Putative GTPase activating protein for Arf | 14 | 129 | IPR001164 | GO:0005096 | |
Cca09g01992 | 325 | ProSiteProfiles | C2 domain profile. | 151 | 268 | IPR000008 | - | |
Cca09g01992 | 325 | SMART | C2_3c | 170 | 265 | IPR000008 | - | |
Cca09g01992 | 325 | Gene3D | C2 domain | 164 | 325 | IPR035892 | - | |
Cca09g01992 | 325 | Pfam | C2 domain | 169 | 259 | IPR000008 | - | |
Cca09g01992 | 325 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 168 | 322 | IPR035892 | - | |
Cca09g01992 | 325 | SMART | arf_gap_3 | 13 | 135 | IPR001164 | GO:0005096 | |
Cca09g01992 | 325 | CDD | C2_ArfGAP | 168 | 312 | - | - | |
Cca09g01992 | 325 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 13 | 127 | IPR001164 | GO:0005096 | |
Cca09g01992 | 325 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 13 | 129 | IPR037278 | - | |
Cca09g01992 | 325 | PRINTS | HIV Rev interacting protein signature | 25 | 44 | IPR001164 | GO:0005096 | |
Cca09g01992 | 325 | PRINTS | HIV Rev interacting protein signature | 44 | 61 | IPR001164 | GO:0005096 | |
Cca09g01992 | 325 | PRINTS | HIV Rev interacting protein signature | 65 | 86 | IPR001164 | GO:0005096 | |
Cca09g01992 | 325 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 | 6 | 324 | - | - | |
Cca09g01992 | 325 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 | 6 | 324 | IPR044518 | GO:0005096|GO:0005543 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca09g01992 | Cca-Chr9 | 44935247 | 44941306 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca09g01992 | 6 | 325 | C2H2 Transcription Factor Family | AT4G21160 | 70.091 | 1.34e-175 | 488 |