Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01991 ATGAAGCTATTTAGCCTTTTAGTGGTGTTATTATCCTTCTTCTCCGTTATGGGTCAGCTTCCTTCACAGGACACTTTAGCATTGCTGGAATTCAAGAAAGGCATCAAGCATGACCCTACTGGTTATGTCCTTAGTTCCTGGAACGAGGAATCCGTTGACTTTGATGGATGCCCATCTACATGGAATGGAGTACTCTGTAATGGTGGTAATGTTGCTGGTGTTGTCCTTGATAACCTTGGTCTTTCTGCTGATGCCAATTTGGGTGTTTTCTTAAGCCTCACAAAGCTTGTAAAACTCTCTATATCCAACAATTCTATCTCGGGAAAACTTCCTGACAACATTGCTGAATTCAAAAGCCTCGAGTTTCTGGATGTATCCAATAATTTCTTTTTTTCATCCTTACCAATGGCAATTGGTAAACTAACTAGCTTGCAGAATCTGTCATTGGCTGGAAATAACTTCTCTGGCCCAATTCCTGACTCTATTTCAGGAATGGCTTCAATCCAATCTTTGGACTTGAGCCGTAATTCATTTTCTGGACAACTGCCAGCATCATTGACTAAGCTGACTAACCTGGTATTACTTAATTTATCTCATAATGGCTTCACTGGTAAAATTCCCAAAGGTTTTGAGCTGATCTTTTCTCTGGAGAAGCTTGACTTGCATGGGAATATGTTTGATGGTCCTTTAGATGATGAATTTATACTTTTTTCAAGTGCCAGCTACGTTGATTTTAGTGAGAATATGCTAGTGAGTTCTAGTTCTCAGCAGCATACGTTTCTGCCACAAATTTCTGAAAGTATTAAGTATCTGAATCTAAGCTACAACCGGCTAACTGGATCATTGGTTAGTGGAGGTGATCAACCAGGTTTTGAATACTTGAAGGTGTTGGACCTCAGTTACAATCAATTATCTGGAGAATTATCTGAATTTGATTTTGTTTATGAACTAATGGTCCTTAAGCTCAGCAACAACAGATTTTCAGGATTTGTACCCTCTGGTCCTCTTAAAGGAGACTCTTTGGTTTTGACTGAACTGGATTTGAGTGGCAACAATCTATCAGGGCCAATAAGTATAATTACATCAACAACATTGCACACACTTAATCTCTCATCCAATGAGTTCACTGGTGAGCTGCCATTGCTGACCGGAAGTTGTGCTGTTCTTGATTTGTCAAATAACAAATTAGAAGGAAATTTAACCAGGGTGATGAAATGGGGGAATATTGAGTTTCTTGATCTCAGTAGGAATCACTTGACAGGATCCATCCCTGAGGTAACTCCTCAGTTTTTGCGATTAAATTATCTGAATCTTTCCCATAACTTTCTTAGTAGATCCCTCCCAAGAGTCTTAACACAATATCCACAGCTTAAAATGCTCGATGTTAGTTCCAACCAGTTAGATGGAAAATTTCTAGATGATTTGCTGATAATGCTCACTTTACAAGAGCTCCATCTTGAAAATAATATGATTTCTGGCAACATTAATTTATCATCATTTTCTCCTCGTCCCTCTGATATTCAGATTCTTGATCTTTCTAATAACCAGTTTAATGGAAATAATTTTTCAGGTTCCCTTCCAACTACCATTGCTAACATGAGTTCCCTAGATTCCTTGGATATATCAGAAAATCATTTTACAGGCCCTTTACCAATTAACATGCCAAAGGAGCTCAAAAAATTTAATGCTTCAAAAAATTATCTGTCTGGAGTTGTCCCAGAAAATCTTAGGAAGTTCCCTAGTTCTTCTTTCTATCCTGGGAATGATAGGTTGCATTTTCCAAATGGTCCTTTTAGATCAACCAATAAACCAGATGAAAATTCCAATAGGAAGCCTGTTGGTAAAGTGATAATCATAGTGTCATGCGTGGTTGCTGTTCTCTTCATGTTAGTCCTGCTGGCTGTCTTTTTCATATACTACATTCGAATATCAAGATCTCCATCGGAATATGCTACTGCTAAAGATATGAGTGAGCACGCTCAACGACAAATCTCTGGCCCTGGTTATGCAAAATACtgttgtgcccaaagtgtATACTTGGGTGGTGCTTTGGTTGTGTCGGCTGAGGATCCTGTGACCTCACAGAAAGGATCATCAACAGAGATTATCAGCCTTGATGAAAACAGGGCAGCTGTAATAGGGTTCTCCCCATCAAAAAATAGCCACTTTTCATCACCAGGGTCTAGTGATTCAGTTTCTGTAGGAAATCATGCAAGACTATATGCAAGATCACCAGATAAATTGAAGGGAGAGCTCTATTTTCTTGATGATGCAACAACATTGACACCTGAGGAGCTGTCTAGAGCCCCAGCTGAAGTTTTGGGGAGAAGCTGCCATGGTACATCTTACAAGGCAACTCTGGAGAATGATTATTTTTTGAGAGTGAAGTGGCTAAGAGAAGGAGTGGCAAAACAGAGAAAAGAATTTTCCATAGAGGCTAAAAAATTTGCTAACATCAGGCATCCCAATGTTGTCGGATTGAGAGGGTACTACTGGGGTCCTACACAGCATGAGAAGCTTATTCTTTCAGATTACATCTCTCCGGGAAGTCTTGCAAGTTTTCTATATGATCGACCAGAGCGAGAAGGTCCACCATTGACCTGGGCTCTGAGGCTGAAAATAGCAGTTGATGTGGCACGTGGGCTGAACTATCTCCACTTTGATCGTGCTGTTCCTCACGGGAACCTCAAAGCAACAAATGTGTTGTTAGATACAGGTGACTTGAATGCACGTGTAGCTGATTACTGCCTCCACAAACTTATGACTCAGGCTGGTACATTTGAACAAATTCTTGATGCTGGGATCTTGGGTTATCGTGCACCAGAGCTTGCTGCTTCCAAGAAGCCAATGCCCTCCTTCAAATCAGATGTTTATGCTTTTGGGGTTATACTTTTGGAACTTTTAACAGGAAGGTGTGCTGGTGATGTTATATCTGGTGAGAAGGAAAGTGTTGATCTGACAAATTGGGTAAGGTTGTGTGTTTCAGAAGGTAGAGGCTCAGAATGTTTTGATGCTGCATTAGTGCATGAAATGGGCAATTCAGTCGTTGAAAAGGGAATGAATGAGGTCCTTGAAATAGCCATTCGATGCATAAGATCTGTTTGTGAGAGGCCAGGTATCAAGACTATATATGAAGATCTTTCGTCTATATAG 3153 0.399 MKLFSLLVVLLSFFSVMGQLPSQDTLALLEFKKGIKHDPTGYVLSSWNEESVDFDGCPSTWNGVLCNGGNVAGVVLDNLGLSADANLGVFLSLTKLVKLSISNNSISGKLPDNIAEFKSLEFLDVSNNFFFSSLPMAIGKLTSLQNLSLAGNNFSGPIPDSISGMASIQSLDLSRNSFSGQLPASLTKLTNLVLLNLSHNGFTGKIPKGFELIFSLEKLDLHGNMFDGPLDDEFILFSSASYVDFSENMLVSSSSQQHTFLPQISESIKYLNLSYNRLTGSLVSGGDQPGFEYLKVLDLSYNQLSGELSEFDFVYELMVLKLSNNRFSGFVPSGPLKGDSLVLTELDLSGNNLSGPISIITSTTLHTLNLSSNEFTGELPLLTGSCAVLDLSNNKLEGNLTRVMKWGNIEFLDLSRNHLTGSIPEVTPQFLRLNYLNLSHNFLSRSLPRVLTQYPQLKMLDVSSNQLDGKFLDDLLIMLTLQELHLENNMISGNINLSSFSPRPSDIQILDLSNNQFNGNNFSGSLPTTIANMSSLDSLDISENHFTGPLPINMPKELKKFNASKNYLSGVVPENLRKFPSSSFYPGNDRLHFPNGPFRSTNKPDENSNRKPVGKVIIIVSCVVAVLFMLVLLAVFFIYYIRISRSPSEYATAKDMSEHAQRQISGPGYAKYCCAQSVYLGGALVVSAEDPVTSQKGSSTEIISLDENRAAVIGFSPSKNSHFSSPGSSDSVSVGNHARLYARSPDKLKGELYFLDDATTLTPEELSRAPAEVLGRSCHGTSYKATLENDYFLRVKWLREGVAKQRKEFSIEAKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPEREGPPLTWALRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTGDLNARVADYCLHKLMTQAGTFEQILDAGILGYRAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVISGEKESVDLTNWVRLCVSEGRGSECFDAALVHEMGNSVVEKGMNEVLEIAIRCIRSVCERPGIKTIYEDLSSI 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01991 1050 Pfam Protein tyrosine and serine/threonine kinase 772 970 IPR001245 GO:0004672|GO:0006468
Cca09g01991 1050 PANTHER OS07G0626500 PROTEIN 6 1050 - -
Cca09g01991 1050 ProSiteProfiles Protein kinase domain profile. 768 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g01991 1050 Pfam Leucine Rich repeat 362 378 IPR001611 GO:0005515
Cca09g01991 1050 Pfam Leucine Rich repeat 293 307 IPR001611 GO:0005515
Cca09g01991 1050 Pfam Leucine Rich repeat 343 355 IPR001611 GO:0005515
Cca09g01991 1050 Gene3D Transferase(Phosphotransferase) domain 1 846 1049 - -
Cca09g01991 1050 Gene3D Phosphorylase Kinase; domain 1 755 845 - -
Cca09g01991 1050 SUPERFAMILY L domain-like 46 380 - -
Cca09g01991 1050 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Cca09g01991 1050 Gene3D Ribonuclease Inhibitor 21 287 IPR032675 -
Cca09g01991 1050 Gene3D Ribonuclease Inhibitor 288 601 IPR032675 -
Cca09g01991 1050 Pfam Leucine rich repeat 412 467 IPR001611 GO:0005515
Cca09g01991 1050 SUPERFAMILY L domain-like 291 581 - -
Cca09g01991 1050 PANTHER - 6 1050 - -
Cca09g01991 1050 SUPERFAMILY Protein kinase-like (PK-like) 772 1046 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01991 Cca-Chr9 44926452 44931392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01991 22 1050 Receptor kinase-like Gene Family AT1G28440 28.131 2.00e-76 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Cca09g01991 PK_Tyr_Ser-Thr 2.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01991 - - ccaj:109802185 1998.4